Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0589 ATGGAGATCTTAGTGCTACTTGCCTTGTTGTTTTCTATTTTACCTCTTCTTTTGCTCTTGAAACTAACGTTTTCTTGGTGGGTTTCACCTATTCTAAACCATCTTAAGCTTAAAAGATGTGGGTTTGGAGGACCACCCCCATGTTTTCCTCTTGGAAACATTCAAGAGATGAAAAAGAAGAATAGCCTTATTAGTTCTTCATTAGGGTCCTCCTCTAATAACCTCTTCCCCCATGATATACACTCCACTGTGTTCCCCTATTTTTCTCGCTGGCAAAACTCTCATGAGGTATTGGCCAAGAGATGGGGAAAACCTAGAGTGTTTAGACATGATAGAGATCCTATGTTCGGAAATGGTTTGGTTATGGTTGAAGGCAATGAATGGGTTCGTCACCGACATGTTATAGCACCAGCATTTTCTCCTCTTAATTTGAAGGCAATGGCAAGCATGATGACCGAGTCTACAAATCAGATGATAGATAGGTGGATTGCACAAATCAACTCCGGCAACCCCGACATCGACGTGGAAAGAGAGGTGGTAGAAATCGCCGGAGAAATCATTGCACAATCAAGCTTTGGCATGAAGGGAAAAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGATCCTTTTTAAGACAACAAGATACGTAGGTGTTCCATTTGGCAAGTGTTTCAACGTCAAGAAAACCCTAGAGGCCAAGAAGCTTGGGAAAGAGATTGACAATCTCTTGTTATCTGTGATAACATCTCGTATGAAATCAATCAAAAGACAAGGTACTCAAGAAGACTTGTTGGGATTGTTGTTGCAAGGAAACTATCAAGGTGATGGCAAGTTAGGGAAGACATTCACTACTAGAGACTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACGGCATTGGCTATTTCATGGACTTTGTTGCTTCTAGCTATGCATGAAGATTGGCAAATCCAGTTAAGAGATGAGATAAGAGAAGTGGTCGGTGATAATCAAGAACTTGATATCAAAGTGCTTGCGGGGCTTAGAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTCTATCCAACGGCACCAAATGTGCAAAGACAAGCAAGAAAAGACATTAAAGTTGATAACTTAACAGTGCCTAATGGGACCAACATGTGGATCGATGTTGTGGCGATGCACCATGACCCGGTTCTGTGGGGAAAAGATGTCAACGAGTTTAGACCAGAGAGGTTCATGAATGATGTGAATGGTGGATGTAACCACAAAATGGGGTACTTGCCCTTTGGGTTTGGAGGGAGGATGTGTGTTGGTAGGAACTTGAGCTTTATGGAGTATAAGATAGTGCTAACCCTACTCCTCTCTAGATTTAGTTTCAAAGTTTCACCTGCTTATAACCATGCACCCTCTATCATGCTCTCCCTTAGGCCCACTTATGGACTTCGTCTCATAGTTCACCCCCTTTAG 1479 0.4212 MEILVLLALLFSILPLLLLLKLTFSWWVSPILNHLKLKRCGFGGPPPCFPLGNIQEMKKKNSLISSSLGSSSNNLFPHDIHSTVFPYFSRWQNSHEVLAKRWGKPRVFRHDRDPMFGNGLVMVEGNEWVRHRHVIAPAFSPLNLKAMASMMTESTNQMIDRWIAQINSGNPDIDVEREVVEIAGEIIAQSSFGMKGKNAKEVSEKLRALQMILFKTTRYVGVPFGKCFNVKKTLEAKKLGKEIDNLLLSVITSRMKSIKRQGTQEDLLGLLLQGNYQGDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAMHEDWQIQLRDEIREVVGDNQELDIKVLAGLRKMKWVMNEVLRLYPTAPNVQRQARKDIKVDNLTVPNGTNMWIDVVAMHHDPVLWGKDVNEFRPERFMNDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKVSPAYNHAPSIMLSLRPTYGLRLIVHPL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0589 492 PANTHER CYTOCHROME P450 FAMILY MEMBER 94 487 - -
Aed7g0589 492 Pfam Cytochrome P450 66 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 96 - -
Aed7g0589 492 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 94 487 - -
Aed7g0589 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Aed7g0589 492 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 Gene3D Cytochrome P450 31 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed7g0589 492 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 5 96 - -
Aed7g0589 492 SUPERFAMILY Cytochrome P450 44 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0589 Aed-Chr7 4321228 4324675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0589 10 492 Cytochrome P450 AT5G52400 54.795 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0589 - - gmx:100810679 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0589 7 4321228 4324675 Aed1g2271 1 18841752 18843757 PCT
Aed1g2270 1 18834500 18836700 Aed7g0589 7 4321228 4324675 PCT