Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0562 ATGGAGCCAGTTCCCACCTACATCACCCACCACAGCTGGGAGCCTTCCGTTGCCATCACCGTCGGTGCGATCATCTTGGCGCTCATCTCGATGGCCATCATCTCCATCTACCTCCGCCGCTGCGCCGAGTCACGCATCATCATCACCACCACCACCACGGTACCCTGCTCCTGCGCGCAGGGGATCAACAAGGAACTCCTCAACACGTTCCCAACGCTCTTCTACTCCAACATCAAGGACCTCAAGAAAGGAAACGAAACGCTCGAATGCGCTGTTTGTTTGACCGATTTCAGCGACAAAGACGCTCTCAGGCTCCTCCCCAAATGCAATCACGTGTTCCACCCTCACTGCATTGACTCCTGGCTCGCGTGTCACGTGACTTGCCCTGTTTGTCGCGCCAATCTCAGCACCACCCAGGATTCGTGTCAGCTTTCCATAACTGTCCACGAGGAGGAACGTTCCCAAAACACATCAACAACAACAACAACCACAGCCGAAACAACAACAACACAAGTTGATCAAAGTCCAAACAATGACGTCAGTCAAGTTTGTGTGGGAGATTCTACACCGACTAATGGTACTGATACAACTAAAATATTGTATATAAATGAGGAACAGTGCTCGTCCTGCGAGCTTGTTTCTGAAGTTGAGTTAAGCTTAGACACGAATTCTACTACTACTAGCAGTGGTGGCGGTGACGGTGATGGTGATGACGACGGGGTTATTGTGTCGGAGAGGAACTTTTCGAGGTCGAACTCGACGGGGCATTCGCTTTTGGAGCAAGGGAAGGGTGTGGAGAGGTACACGTTGAGGTTGCCGGAAGATGTGAGGAGGTACATTCTTGTGAACCATGGAAGGAGTGTTCAACGTTCCGCTAGTGTTAAAGGGTTGTGTTGGAGTGACAGCGAAGAGAGTCATGCGGGGAAGAGGGTAGAGAAGAGGTGGATGATTTGCACGCCGCCATTTGTGGCGAGCCATGGTTGA 984 0.5163 MEPVPTYITHHSWEPSVAITVGAIILALISMAIISIYLRRCAESRIIITTTTTVPCSCAQGINKELLNTFPTLFYSNIKDLKKGNETLECAVCLTDFSDKDALRLLPKCNHVFHPHCIDSWLACHVTCPVCRANLSTTQDSCQLSITVHEEERSQNTSTTTTTTAETTTTQVDQSPNNDVSQVCVGDSTPTNGTDTTKILYINEEQCSSCELVSEVELSLDTNSTTTSSGGGDGDGDDDGVIVSERNFSRSNSTGHSLLEQGKGVERYTLRLPEDVRRYILVNHGRSVQRSASVKGLCWSDSEESHAGKRVEKRWMICTPPFVASHG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0562 327 MobiDBLite consensus disorder prediction 149 179 - -
Aed7g0562 327 SMART ring_2 90 131 IPR001841 -
Aed7g0562 327 SUPERFAMILY RING/U-box 78 138 - -
Aed7g0562 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 139 IPR013083 -
Aed7g0562 327 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Aed7g0562 327 PANTHER RING FINGER DOMAIN-CONTAINING 1 303 - -
Aed7g0562 327 Pfam Ring finger domain 89 132 IPR001841 -
Aed7g0562 327 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 303 - -
Aed7g0562 327 CDD RING-H2_PA-TM-RING 89 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0562 Aed-Chr7 4111010 4111993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0562 15 323 Rapid Response to Elicitors AT3G05200 32.036 5.14e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0562 K10664 - gmx:100809056 442.965