Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0539 ATGGGCTTCCTCCGGCGACTCTTCGGCGGCAAGAAGCACCACAATCCACCACCCTCCGACGCCACCTCCAAACCCAACACCAAAGACAAGAAAACATGGAGCTTCGTCAAACACAGTACGAGGTACAAGCCCAACACATTACCAACACTTAACAACACCACCTTTGACCCTTCCACTTCCTCTGCTCCTTTCACCGATTCTCTGGACGCTAACAAGCATGCCATCGCCGTCGCCGCCGCAACCGCCGCTGTCGCCGAAGCCGCTCTCGCAGCCGCACATGCTGCAGCCGAGGTTGTCAGGCTCACCAGCGCCACCACCGGTGCTGCCTCCACCCGCCCCGCCACTCCGCCGAAGCACCGGCGCGTGGCCGAGCAAACCGCCGCCGCTGTCAAAATCCAGTCCGCGTTCCGAGGTTACCTGGCAAGGAGGGCATTGAGAGCACTTAAGGCGTTGGTGAAGTTGCAAGCATTGGTGAGGGGTCACATTGTGAGAAAGCAAACTGCAGACATGCTAAGGCGCATGCAAACTTTGGTGAAACTGCAGTCCCGGGCACGTGCAACTCGTGGGAACTTGTCAGATACTAATATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAAATTATCAGCACTCACTTCGTGCCTATAGTACGAAATTTGATGGATCTGTTCTCAAGAGGTGTAGTTCCAATGCAAATTTTAGGGACATTGACTTGGAGAAAGCCCGGTTTGGTTCCCATTGGTTAGACAGTTGGATGGAAGAAAACTCATGGAGCCAAACTAGAGATGCTTCATTGAAAAATGGACACATTGATGATGAGAAGAGTGACAAGATTCTTGAAGTGGATACTTGGAAGCCACACTTGAACTCACACCATAGTAGTGGCACCTCATCATTTCAGGCATCATCACATCATTATTTGCCTTCTGATTACAACAATGACAATTTTGTGGCATATGAGTCTCCATCAAAACGTTCTTCCAAGGCTCTAAACTCAAGTCTCTCTTCTAGGGAGGTTCCACCCCTTGGCTCTTTGAAACTTTACAAAGGAAAGGAAGAGGTGGCGGTGGCTTTGAGAAATGTTGAGGATAGTCCTCAAGCAGCATTTTCTGCCTCCTCTAGACTTGGAAGTGGTGCAAGGAGAGGTCCATTCACACCAACAAAGAGTGAGTGTGCATGGAGTTTGTTCAGTGGCTACCCTGGTCATCCCAATTACATGGCAAATACTGAGTCTTCTAAAGCCAAGGTTAGGTCACATAGTGCTCCAAGGCAAAGAATGGAGTTTGAGAGATATGGTCATTCCACACGAAGGTCTCTTTGGGAAGCAGGGCCTAGTTCTGATAGGGATTCTGACTTTAGGACTAATATTAAGGCCTATGCTGCAACCACGAGCAGCAGCAGCAGCTTGAACTTTAACAGAATTGGGAGTGCCAATTTAAGGTGA 1455 0.4948 MGFLRRLFGGKKHHNPPPSDATSKPNTKDKKTWSFVKHSTRYKPNTLPTLNNTTFDPSTSSAPFTDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSATTGAASTRPATPPKHRRVAEQTAAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVKLQSRARATRGNLSDTNMHSFKSSLSHYPVPENYQHSLRAYSTKFDGSVLKRCSSNANFRDIDLEKARFGSHWLDSWMEENSWSQTRDASLKNGHIDDEKSDKILEVDTWKPHLNSHHSSGTSSFQASSHHYLPSDYNNDNFVAYESPSKRSSKALNSSLSSREVPPLGSLKLYKGKEEVAVALRNVEDSPQAAFSASSRLGSGARRGPFTPTKSECAWSLFSGYPGHPNYMANTESSKAKVRSHSAPRQRMEFERYGHSTRRSLWEAGPSSDRDSDFRTNIKAYAATTSSSSSLNFNRIGSANLR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0539 484 MobiDBLite consensus disorder prediction 1 30 - -
Aed7g0539 484 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Aed7g0539 484 Pfam Protein of unknown function (DUF4005) 379 444 IPR025064 -
Aed7g0539 484 PANTHER IQ-DOMAIN 5-RELATED 1 482 - -
Aed7g0539 484 PANTHER CALMODULIN-BINDING PROTEIN 1 482 - -
Aed7g0539 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 170 IPR027417 -
Aed7g0539 484 SMART iq_5 147 168 IPR000048 GO:0005515
Aed7g0539 484 SMART iq_5 124 146 IPR000048 GO:0005515
Aed7g0539 484 Pfam IQ calmodulin-binding motif 149 166 IPR000048 GO:0005515
Aed7g0539 484 Pfam IQ calmodulin-binding motif 126 146 IPR000048 GO:0005515
Aed7g0539 484 Gene3D - 125 167 - -
Aed7g0539 484 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0539 Aed-Chr7 3973997 3979427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0539 1 443 IQD Protein Family AT5G62070 44.079 1.25e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0539 - - gmx:100785181 708.753