Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0533 ATGACACCTTCACGAGTGGCAGGTGGGTTAACCCAATCATCATCAAACTCTGGAATTTTCTATCAAGGAGATGGGCAGTCACAGAATGTTGCTAACTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGCACGGTACCAGGAGCTGGTCGATCAAACTTGGTGATGGATGTTTCCTCTGTAGTACAACACAGCTCTCATCAAGATCAGAATGTTCAACATTTGCAGCAGAATCAGCAGCAGCTGCAGGGTGCTTCAAGTGCTACGTCTTTGCCTGCAGCTCAAACTGGCCCTTCTACGCTCCAAATTGGTGGTGCACAAATTGGATATCAAGCAGGAGGATATAATGCAACATCAGTATTGCCTATTGGAGAAAGTTCGTGGCTGAATATTATTCTCCCCCGTGCAAAGAAACGGTGGTGCTTGTCTTTATATAGCAATGTTGGGCATCATGCACTTGGTGTTTTTCCCCAAGCATCTATTGATGCATGGCACTGTGACATATGTGAGGCAACTTATGAAGTATTACCTAGACTTAATGAAATCAAATTTGGAAGTGGAGTAATTGATGAACTATTGTTTCTGGACTTGCCACGTGAAATGAGATTCCCTTCTGGTGCGATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCATGTTGTTCGTGAAGGTCAACTTCGCATCATATTCACTCAAGACTTGAAGATTTTATCTTGGGAGTTCTGTGCAAGACGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAGTTAGTTCAGGTAGCTAAAAAATGCCAGAGTACAATTGCTGAAAGTGGGTTGGATGGGGTTTCTCAACAAGACATACAAACAAACAGCAACATGTTGTTGACAGCTGGGGGTCAGCTTGCGAAGGTTTTGGAGATGCAATCACTAAATGAGTTGGGCTTTTCTAAAAGATATGTGAGATGTTTGCAGATTTCAGAGGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCCGAGCACAATATTGGGCCAATTGAGAGCTTGAAAAATTACCCTCGACTTGCAACAGCCTCAAAGCACCAGATGCAAAAGATGCAGGAAATGGAACAGCTAGCAAATGTCCAAGGTCTGCCTACTGATCGAAGCACACTCAATAAGCTAATGGCTCTGAATCCTGGAAACCATATAAACAACAGTCATAATATGGTTAATCGTGGTGGTTGGAGTGGGTCAGCACAAGCTGCTTTAGCACTGTCCAACTACCAGAATCTTCTCATGAGGCAAAATTCAATAAATTCTAGCCCTGGCTCACTTCAACGAGAAGGGTCCTCTTTCAATAATTCAAACCAGAGAAACAATGGACCTATGTCAAGGAAAAATAGCTTCAAAACTGCTTCAACTAGTGATTCTTCTGCTGGTGGCGGTGGTGGTGGTGGTAGGAACAATGGATTCATCCAGAGAACATCTGAGATGCCACAAAATCTACATTTGCAAGATGTGGTTCAGGATATTGGCAATGATTTCACGGATAACCCCTTCTTTAACTGTGATCTTGATGACTCCGCTCGCGGTTTCGCATTAGGTTTGGCTCTGGAGAGCTACTTAGACTCCAACCAAGGGTGGATGCCCCCCATGACACCTTCTCGGGTGGCAGGAGGGTTAACCCAATCATCTTCACATTCTGGAATTTTCTTTCAGGGAGATGGGCAGTCGCAGAATGTAGTTAACTCTCATTTAAACTCATCTTTTGTTAACTCCTCTAGCACTGTTCCAGGAGCTGGTCGATCAAACCTGGGTCCGGTTTCTGGGGATATGAATAATGCAGTTTTGAACAGCGTGGCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTTACGGATGCAAATTCTGCTCTCTCTGGTGGGCTCCATTTGCAGAGAAGTGCCAGTTTCAACACAGACTCATACTTACGATTACCTGCCTCACCTATGTCATTTACGTCAAATAATATTAGTATTTCTGGCTCATCAGTGATGGATGGTTCCTCTGTAGTACAACAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCATAATCAGCAGCAGCCACAGGGTGCTTCAAGTGCTACATCTTTGCCTGCATCTCAAACTGGTCCGTCTTCACTCCAAATGGGCGCACAAGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCATTATATAGTAATGTTGGGCATCATGCACTTGGTGTTTTTCCCCAAGCAGCTATGGATGCATGGCAGTGTGACATATGTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATCAAATTTGGCAGTGGAGTGATTGATGAACTTTTGTTTCTGGACTTGCCTCGTGAAATAAGATTTCCTTCTGGTGCGATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGCATCATATTCACTCAAGACTTGAAGATCTTAACTTGGGAGTTCTGTGCAAGACGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTAGTTCAGATAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGAGCAGATGGGGTTTCTCAGGAAGACTTACAAACAAACAGCAACATGGTATTGACAGCAGGGCGCCAGCTTGCAAAGATTTTGGAGTTGCAATCACTGAATGACTTGGGCTTTTCTAAAAGATATGTGAGATGTTTGCAGATTTCGGAGGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCAGAGCGCAAAATTGGTGCAATTGAGAGTTTGAAAAATTATCCTCGACTAGTAACAGCCTCAAAGGTCCAGATGCAAAAGATGCAAGAAATGGAACAACTGGCAAATGCTCAAGGTCTGCCAACTGATCGAAACACACTCAATAAGCTAATGGCAATGAATTCTGGAATGAACAACCATGTAAACAACACTCATAATATGGTTAATCGTGGTGCTTTGAGTGGGTCAGCCCAAGCTGCTTTAGCCCTGACCAACTACCAAAATATTCTAATGAGGCAGAATTCAATGAATTCTAGCGGTAGCTCACTTCAGCGAGAAGGGTCCTTCAATAATTCAAACCAGAGTCCCTCTTCTGCTTTGCAAGGAGCTGGTCCTGCTTTAATGCCAGGCTCAATGCAGAACTCACCTGGAGGTGGTTTCTCAAGTCCCCATCTATCCCCACAACAGCAGCAGCAGCAACAACTCCTTCAACAGCGCACATTAAGTGGAAATGGTTTACTTCAACAAAATCATTCACAGGGGCCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGATGATCCAGCAACTGCTGCAGGAGATGTCAAATAACAATGGGGGAATGCAATCACAGTCTCTTGGTGGGCCCAATGTAAATGGGAGTATTGCAAAGAATGCAATGGGTTTTGGGGGCCATACTCCATCCTTAAGTGGAGGTTCTGCCAATGTTCCAGGAAACAATGGAGGACCTATTTCAAGGAATAATAGCTTCAAAACAGCTTCAAACAGTGATTCTGCTGGTGGTGGTGGTGGTGGTGGCAACAATGGATTCAGCCACAGAACATCTGATATGCCACAAAATCTACATTTGCAAGATGAGGTTCAGGATATTGGCAGTGAGTTCACGGATAGCCCCTTCTTTAACAGCGATCTTGATGATAACATGGGTTTCGGCTGGAAGGCATAA 3816 0.4371 MTPSRVAGGLTQSSSNSGIFYQGDGQSQNVANSHLSSSFVNSSSTVPGAGRSNLVMDVSSVVQHSSHQDQNVQHLQQNQQQLQGASSATSLPAAQTGPSTLQIGGAQIGYQAGGYNATSVLPIGESSWLNIILPRAKKRWCLSLYSNVGHHALGVFPQASIDAWHCDICEATYEVLPRLNEIKFGSGVIDELLFLDLPREMRFPSGAMMLEYGKAVQESVYEQLHVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAKKCQSTIAESGLDGVSQQDIQTNSNMLLTAGGQLAKVLEMQSLNELGFSKRYVRCLQISEVVNSMKDLIDICAEHNIGPIESLKNYPRLATASKHQMQKMQEMEQLANVQGLPTDRSTLNKLMALNPGNHINNSHNMVNRGGWSGSAQAALALSNYQNLLMRQNSINSSPGSLQREGSSFNNSNQRNNGPMSRKNSFKTASTSDSSAGGGGGGGRNNGFIQRTSEMPQNLHLQDVVQDIGNDFTDNPFFNCDLDDSARGFALGLALESYLDSNQGWMPPMTPSRVAGGLTQSSSHSGIFFQGDGQSQNVVNSHLNSSFVNSSSTVPGAGRSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGLHLQRSASFNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQHNQQQPQGASSATSLPASQTGPSSLQMGAQDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQAAMDAWQCDICEATYEVLPRLNEIKFGSGVIDELLFLDLPREIRFPSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILTWEFCARRHEELLPRRLVAPQVNQLVQIAQKCQSTIAESGADGVSQEDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICAERKIGAIESLKNYPRLVTASKVQMQKMQEMEQLANAQGLPTDRNTLNKLMAMNSGMNNHVNNTHNMVNRGALSGSAQAALALTNYQNILMRQNSMNSSGSSLQREGSFNNSNQSPSSALQGAGPALMPGSMQNSPGGGFSSPHLSPQQQQQQQLLQQRTLSGNGLLQQNHSQGPQGNQALQQQQMIQQLLQEMSNNNGGMQSQSLGGPNVNGSIAKNAMGFGGHTPSLSGGSANVPGNNGGPISRNNSFKTASNSDSAGGGGGGGNNGFSHRTSDMPQNLHLQDEVQDIGSEFTDSPFFNSDLDDNMGFGWKA 1271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0533 1271 PANTHER LIM DOMAIN-BINDING PROTEIN 556 702 IPR029005 -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 437 482 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 1 25 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 679 727 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 1053 1078 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 1174 1262 - -
Aed7g0533 1271 Pfam LIM-domain binding protein 170 356 IPR029005 -
Aed7g0533 1271 Pfam LIM-domain binding protein 729 969 IPR029005 -
Aed7g0533 1271 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 730 1270 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 1122 1141 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 437 493 - -
Aed7g0533 1271 PANTHER LIM DOMAIN-BINDING PROTEIN 66 454 IPR029005 -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 61 96 - -
Aed7g0533 1271 PANTHER LIM DOMAIN-BINDING PROTEIN 730 1270 IPR029005 -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 1185 1259 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 1053 1114 - -
Aed7g0533 1271 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 66 454 - -
Aed7g0533 1271 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 556 702 - -
Aed7g0533 1271 MobiDBLite consensus disorder prediction 1091 1114 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed7g0533 Aed-Chr7 3903150 3915393 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0533 730 973 C2H2 Transcription Factor Family AT1G43850 59.524 3.09e-91 313
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0533 - - ccaj:109803720 1030.78
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0533 7 3903150 3915393 Aed7g0533 7 3903150 3915393 ECH