Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0527 ATGTCAGTTCTTACCGCCAAGGGCGCCATGAATGCTTTGGAGATTCTCAGAGAGTTTCAAGGATTTATTGATCTCCTCATTACAGAACTTCATATAACTGGGATGAATGGATTTGAATTTCAGAAGTGTGTTCAAAATAATTACCACATACCAGTGATAATTATGTCTGCGGATGCAAGACAAAGTGTAATTTCAATGAGTTTGACAATTGGTACAGCACAGTATATTTTGAAACCTTTTTCTGCTGACGACTTCAGAGACATTTGGAAGCATGCTATGGATGCTAAGAATAGGAAACTAGCTATTGCAAATAACAATGAAGGAGATGAAAACAATTCTATTCAGGATGTTAACTCTGCAACATCATCATCGAATGTGAGCAAGAAAAAAAGGAAGTATTGCCCAAAAAAGAATTCACAAGAGAATAAGGAACGCGAAAGTGGTGAAGGTTCTCAGCTAGTCAAGAAACCAAAGGTTGTTTGGACAGGATACCTTCACAATCTCTTTCAGCTTGCCATAAGACAGATTGGATTGGACAAAGCTGTGCCAAAGACAATTCTTCAACTCATGGGTGTGCCAAACTTGACAAGAGAGAATGTTGCAAGTCATTTACAGAAGTATCGCATATTCCTGAGAAAAGTAGCTGGGAAAGGAGTGGCTGAGGGCTTATCTGGCAGGGATCTAAGGTCAAGGTTTGCCGCTGGCCTTTCAGCATCAATGATTCGGGATTTCCAAGAACAAGCTGCGAAAGCGCGTGATCCTGTGCAGCAATATATGAGAGGAATAGCACATCAATCAGGGTACGGAGGGATAGCCAATGCTGTTAAACATAACAATGTTTCAACAAGTACTAATTATTCAACTAATACTCCACTTGGAAGATTCAATCAATTTCCCTATCCATATCACAATGGCTCGAATATGATGCTTCAGAACCAGCAAGGTAGTTCTTTGAATCAAGCAATACTTGGAGTACAATCAAGCTTGGGAAGCAATGCTGAGGCCAATAATATTCAGCAAAACATGCTGGGAAGCAATGTTGGGGCCAATAATATGCAGCAAAACATGTTGGGAAGCAATGTTGGGGCCAATAATATGCAGCAAAACATGTTGGGAAGCTATTCTGGGGGCAATAATATGCAGCAAAACATGTTGGGAAGCTATGCAAACCAACCATTTTATGCACAAAGCTCTTACAACAATGCTCGTGCTGTCTTTCCATCAGATGGAGTAATGGGACATAGCTTGATGACTTCTGCAAATGGCCTAACTGGAGGTGTGAACTATGGTGACAACCAGTTGATGTATCCAAACTATGGTTCATTGGGAAATAATAATAAAAACTTTAGCTATGGTCAAGGAAATTGGAACATGGGATCTTTGAACAACTCTAATAATAGTATTCTGCCTTGGACTAGTACTTCTACTTATAATCCCAACTGTAACATTCAACTGAATGGTGGATCACAAATGGTTGGAAATGGAATACAAGGAGGGTTGATCAACAATACTATTGGTATTACGGATTCGGTTGCAAACAAAAATAGTTTTGGCTTGATCAATGACACAACTCAAAATGCAAACAACAATGTGACCCCTTTGGGACAAGGAAAGTTTGGTTTTGCTTCTGCTTCTGCTTCTACTTCTACTTCTACTTCTAACGCTGTGGAGGATTGGTCAAGTGGGGTTCCAGCAACATTAATCACTAATAATGGAACTCAAGTTGCAGAAAATATTCCAGCCAACCCAGAACTGCCTCAACAACTACATGACAATGTTGCAGAAAATCATATTGGTACTTCAATTGGTGAGGGTACTGTCAACCAAGAAGATGACCTTTCTGATCTTTTCATGATGATAAATGATATGCCGGATCTTTTTGAGCTTGAAAAGAATCCTATTACAAATGACATCTTGAAGTCTGACTTTTCAAGCTTTGATAATGCTATGCAGAACCAGCACATCGCTGTAAGAACATCAAGTCTACCAGAGGAGACCCCAGCGAGCAACAACAATTCTGATCAGATGGAGGGTGATTACGGATTTGCAGAGATGGAACCCTTGGACAGTTTCATGACCAATGATGTTGCCTCAGCAATTAACTCGGCTATCGATCAGGACTGGGATTTTAAACTGATCGAAGCCTTGTTTGGGAACGGGTCTAACTAG 2169 0.402 MSVLTAKGAMNALEILREFQGFIDLLITELHITGMNGFEFQKCVQNNYHIPVIIMSADARQSVISMSLTIGTAQYILKPFSADDFRDIWKHAMDAKNRKLAIANNNEGDENNSIQDVNSATSSSNVSKKKRKYCPKKNSQENKERESGEGSQLVKKPKVVWTGYLHNLFQLAIRQIGLDKAVPKTILQLMGVPNLTRENVASHLQKYRIFLRKVAGKGVAEGLSGRDLRSRFAAGLSASMIRDFQEQAAKARDPVQQYMRGIAHQSGYGGIANAVKHNNVSTSTNYSTNTPLGRFNQFPYPYHNGSNMMLQNQQGSSLNQAILGVQSSLGSNAEANNIQQNMLGSNVGANNMQQNMLGSNVGANNMQQNMLGSYSGGNNMQQNMLGSYANQPFYAQSSYNNARAVFPSDGVMGHSLMTSANGLTGGVNYGDNQLMYPNYGSLGNNNKNFSYGQGNWNMGSLNNSNNSILPWTSTSTYNPNCNIQLNGGSQMVGNGIQGGLINNTIGITDSVANKNSFGLINDTTQNANNNVTPLGQGKFGFASASASTSTSTSNAVEDWSSGVPATLITNNGTQVAENIPANPELPQQLHDNVAENHIGTSIGEGTVNQEDDLSDLFMMINDMPDLFELEKNPITNDILKSDFSSFDNAMQNQHIAVRTSSLPEETPASNNNSDQMEGDYGFAEMEPLDSFMTNDVASAINSAIDQDWDFKLIEALFGNGSN 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0527 722 MobiDBLite consensus disorder prediction 106 128 - -
Aed7g0527 722 MobiDBLite consensus disorder prediction 657 679 - -
Aed7g0527 722 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 518 IPR045279 GO:0009736
Aed7g0527 722 PANTHER RESPONSE REGULATOR 23-RELATED 3 518 - -
Aed7g0527 722 Gene3D - 1 109 - -
Aed7g0527 722 Pfam Response regulator receiver domain 2 87 IPR001789 GO:0000160
Aed7g0527 722 MobiDBLite consensus disorder prediction 137 152 - -
Aed7g0527 722 Gene3D - 153 215 - -
Aed7g0527 722 ProSiteProfiles Response regulatory domain profile. 1 93 IPR001789 GO:0000160
Aed7g0527 722 SUPERFAMILY CheY-like 2 96 IPR011006 -
Aed7g0527 722 MobiDBLite consensus disorder prediction 106 152 - -
Aed7g0527 722 SUPERFAMILY Homeodomain-like 154 213 IPR009057 -
Aed7g0527 722 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 156 209 IPR006447 GO:0003677
Aed7g0527 722 MobiDBLite consensus disorder prediction 657 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0527 Aed-Chr7 3837047 3840814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0527 1 374 Response Regulator Gene Family AT5G07210 31.719 1.49e-43 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed7g0527 Response_reg 5.7e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0527 - K14491 gmx:102663776 671.389