Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0526 ATGTTTACTTTGAATCACTACTCTTCTGACATGTACTATGTTTCCCCTGAGCTCTCCTCCTCTTTCGACACCTCCTCGCCGCCTTCAGAAGGCTCTCGCGGTGTCGCATTCTCCGACGAGGTGCGCCTGGCCGTCAGGCACCCCAAGAAGCGCGCCGGCCGGAAGAAGTTCCGGGAGACACGCCACCCGGTGTACCGTGGCGTCAGGAGGAGGAACTCCGATAAGTGGGTGTGTGAGGTCAGGGAGCCCAACAAGAAGTCAAGGATTTGGTTGGGGACTTTCCCCACGCCGGAGATGGCGGCGCGGGCGCACGACGTGGCGGCATTGGCCCTCAGGGGCCGGTACGCCTGCCTCAACTTCGCTGACTCAGCGTGGCGGTTGCCAGTTCCCGCCACAGCCGAGGCTAAAGATATACAGAAGGCAGCAGCTTCTGCTGCCGAGGCTTTCAGACCAAATCAGACTTCAAAAACCACTAACACAAGGCAAGAATGTGTTGAGGCAGCGATCACTACCATGACAACAAAGACAACGACAACAACGATTGAACAAGGACAAGAACAAGGCGTGTTTTATATGGAAGAAGAGGAAGAGCAAGTGTTGGATATGCCCGAGTTGCTTAGGAACATGGTGCTAATGTCTCCAACACATTGCATGGGGTATGAGTATGAAGATGCTGACTTGGACACTCAAGATGCTGAGGTGTCACTATGGAGTTTCTCAATCTAA 726 0.5413 MFTLNHYSSDMYYVSPELSSSFDTSSPPSEGSRGVAFSDEVRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKSRIWLGTFPTPEMAARAHDVAALALRGRYACLNFADSAWRLPVPATAEAKDIQKAAASAAEAFRPNQTSKTTNTRQECVEAAITTMTTKTTTTTIEQGQEQGVFYMEEEEEQVLDMPELLRNMVLMSPTHCMGYEYEDADLDTQDAEVSLWSFSI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0526 241 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Aed7g0526 241 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 241 - -
Aed7g0526 241 SUPERFAMILY DNA-binding domain 64 123 IPR016177 GO:0003677
Aed7g0526 241 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Aed7g0526 241 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Aed7g0526 241 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Aed7g0526 241 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Aed7g0526 241 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 241 IPR045277 GO:0003700
Aed7g0526 241 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Aed7g0526 241 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0526 Aed-Chr7 3821126 3821851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0526 42 239 AP2-EREBP Transcription Factor Family AT5G51990 58.500 2.57e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed7g0526 AP2 9.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0526 - - gmx:547622 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0526 7 3821126 3821851 Aed1g2222 1 18507936 18508550 PCT