Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0498 AACTTCTTTCTTCTTCTCTCAAACGAACTAAGATTCTATACACAGATTCTTCCTCGATCGAAAGAATGCACTTCAAACAATACTGTTGTTTCCTCAAAGATGAAGGGCAAAGCAAAATACAGTATGATTGCAGTGAAGCGGTTGAAGACAATGACTGCAAAGGCAGAGATGGAGTTTGCAGTGGAAGTGGAAGTGTTAGGAAGAGTGAGGCATAAGAATTTGTTGGGATTGAGAGGATTCTATGCAGGAGGAGATGAAAGATTGATTGTGTATGATTACATGCCAAACCATAGCTTGCTCACTCATTTGCATGGTCCACTTGCTAAGGAATGTCAACTAGATTGGCCCAGAAGAATCAGCATAGCAATTGGAGCTGCTGAAGGTTTAGCGTATCTGCACCATGAATCAACTCCTCACATCATACACAGAGATATAAAAGCAAGCAATGTTCTTCTAGACCCTGAATTTCAAGCCAAGGTTGCTGATTTTGGTTTTGCAAAGTTGGTGCCGGATGGTGTGACCCATCTTACCACAAAAGTCAAAGGCACCCTAGGATATTTGGCTCCAGAATACGCCATGTGGGGGAAGGTTTCTGAGAGTTGTGATGTTTACAGCTTTGGAATTTTACTTTTGGAGATTATTAGTGCAAAGAAACCAATTGAGAAATTCCCTGGTGGAGTGAAAAGGGACATTGTTCAATGGGTCACACCATATGTCAGTAAAGATCTCTTTGACAACATTGCGGATCCAAAGTTGAAGGGGAAATATGATTTGGAGCAATTGAAAAATGTTACAACCATAGCTCTGAGATGCACCGAGAGTAGTGAGAATAAGAGGCCTAGCATGAAAGAGGTGGTGGATTGGCTCAAGAATGGTGTAGGGATCAGCACTTAG 894 0.4172 NFFLLLSNELRFYTQILPRSKECTSNNTVVSSKMKGKAKYSMIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGPLAKECQLDWPRRISIAIGAAEGLAYLHHESTPHIIHRDIKASNVLLDPEFQAKVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKFPGGVKRDIVQWVTPYVSKDLFDNIADPKLKGKYDLEQLKNVTTIALRCTESSENKRPSMKEVVDWLKNGVGIST 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0498 297 Gene3D Phosphorylase Kinase; domain 1 28 94 - -
Aed7g0498 297 Gene3D Transferase(Phosphotransferase) domain 1 95 293 - -
Aed7g0498 297 Pfam Protein tyrosine and serine/threonine kinase 29 287 IPR001245 GO:0004672|GO:0006468
Aed7g0498 297 PANTHER OS01G0253100 PROTEIN 38 294 IPR045271 GO:0004714|GO:0006468
Aed7g0498 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Aed7g0498 297 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 38 294 - -
Aed7g0498 297 CDD STKc_IRAK 43 291 - -
Aed7g0498 297 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0498 297 PIRSF ILK 12 292 - -
Aed7g0498 297 SUPERFAMILY Protein kinase-like (PK-like) 41 291 IPR011009 -
Aed7g0498 297 SMART serkin_6 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0498 Aed-Chr7 3620346 3622118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0498 38 290 Receptor kinase-like Gene Family AT4G02010 45.136 7.33e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Aed7g0498 PK_Tyr_Ser-Thr 3.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0498 - - gmx:100800710 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0498 7 3620346 3622118 Aed7g0498 7 3620346 3622118 ECH
Aed7g0498 7 3620346 3622118 Aed1g2202 1 18383712 18384451 PCT