Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0497 ATGGATGAGAACAAGAAATGGATGCATAAGGAAACTGAAAAACACAGAAGGGAAGAGATGAGAAAACTCTGCGCCACCCTTAGATCTCTCCTTCCTTTAGAATATATTAAGCTAGACTCTTGTAGTTTAAGAGGAAAACGCTCAACCTCTGATCATGTGAATGAGGCTATGAATTATATCAACCACCTACAAAACAAGGTGAAGCAATTGCAAGAAAAGAGGGATGAGTTACTGAAGGTGTCAAATTTGAGTAAAAATTTTGGTGCTGAAAATGAAAGCTCTAGTACTAGCCATCTTGCACCCTTGGTTTCTGTTCATCCTTTCTTGGGAGGACTTGAGATCTTGTGCAGTTACAGCTTCAGGAAAAGTGTGTTTCCCATGTCAAGAGTGTTGGATATTCTGCTTAAAGAAGGGCTCAACGTGGTTACCACTACTTCAATCAGAAGAGATGGCAGATTCATACACAATATACTATCTGAGGATCCAAATCATCCGAATATCACTGGCACGGATTACTCTGAACTGCACATAAAGCTTACGGAGGCAATATTATCTTCAAGTTTGCAAGTGACTTTGCCAGAACCTGAAAATTGCTAA 597 0.397 MDENKKWMHKETEKHRREEMRKLCATLRSLLPLEYIKLDSCSLRGKRSTSDHVNEAMNYINHLQNKVKQLQEKRDELLKVSNLSKNFGAENESSSTSHLAPLVSVHPFLGGLEILCSYSFRKSVFPMSRVLDILLKEGLNVVTTTSIRRDGRFIHNILSEDPNHPNITGTDYSELHIKLTEAILSSSLQVTLPEPENC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0497 198 Gene3D - 1 88 IPR036638 GO:0046983
Aed7g0497 198 CDD bHLH_AtORG2_like 5 88 - -
Aed7g0497 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 4 63 IPR011598 GO:0046983
Aed7g0497 198 PANTHER TRANSCRIPTION FACTOR 1 191 - -
Aed7g0497 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 79 IPR036638 GO:0046983
Aed7g0497 198 Pfam Helix-loop-helix DNA-binding domain 6 64 IPR011598 GO:0046983
Aed7g0497 198 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 191 IPR015660 GO:0003700|GO:0006357
Aed7g0497 198 Coils Coil 53 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0497 Aed-Chr7 3614448 3615421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0497 2 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 40.123 1.79e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g0497 HLH 2.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0497 - - gmx:100795953 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0497 7 3614448 3615421 Aed7g0497 7 3614448 3615421 ECH