Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0496 ATGTTTCCTTTACAACGAGGCAATGAGCTGGTTATTCAGTTTTCTAATAGTCCCCACCACCAACAACACAAAATCTCCGAAGATCTGATTCTGGATGATTATGCTTCTCTGGATGTCAATGATTCTGACCAAAAAATCACTTCTAGTAGCACCCAACCAACAAAGAAACTTTTCTATGGGGGGACAAATAAGAAGAATCATGACTCTAACGTCGAACATAAGAAGAAGAAGATGATTCATAAGGAGATTGAAAGGCAAAGGAGACAAGAAATGACAACCTTCTATGCCTCTCTTAGATCCCTTCTCCCTCTTCAGTTCATCAAGGGAAAGCGTTCAATATCTGACCACATGAACGAGGCAGTGAATTACATAAAGCACATGCAGAACAATATCAAAGAACTTGGTGCCAAGAGAGATGAACTGAAGAAACACTTCAATCATTGCAATAATATGGAAAATAACCATGGCGGCTTGCAAAAATCTTGCAACTTTACTATCCATGAGAATAACGGTATTATGGGAATCGAACTCACCAGTGGCTTCAGAGAGGAAAAGCCTAAACTTTCAAAGTTACTACAGTTTTTGACTGAAGAAGGACTTGAAGTTGTTAGTTGCCTTTCAACAGAAACCAATGGCAGATTGCTCCACAGTGTGCAGTGTGAGGTTAACAATTCCAACAGTGTAGATCTACCTGAGCTGAGAAAGAAAGTTTCTAATGCATTTCCAACATTTAGATGTTCTGATTAA 747 0.3896 MFPLQRGNELVIQFSNSPHHQQHKISEDLILDDYASLDVNDSDQKITSSSTQPTKKLFYGGTNKKNHDSNVEHKKKKMIHKEIERQRRQEMTTFYASLRSLLPLQFIKGKRSISDHMNEAVNYIKHMQNNIKELGAKRDELKKHFNHCNNMENNHGGLQKSCNFTIHENNGIMGIELTSGFREEKPKLSKLLQFLTEEGLEVVSCLSTETNGRLLHSVQCEVNNSNSVDLPELRKKVSNAFPTFRCSD 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0496 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 127 IPR011598 GO:0046983
Aed7g0496 248 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 246 - -
Aed7g0496 248 Gene3D - 66 159 IPR036638 GO:0046983
Aed7g0496 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 150 IPR036638 GO:0046983
Aed7g0496 248 Coils Coil 124 144 - -
Aed7g0496 248 Pfam Helix-loop-helix DNA-binding domain 76 128 IPR011598 GO:0046983
Aed7g0496 248 MobiDBLite consensus disorder prediction 43 75 - -
Aed7g0496 248 SMART finulus 81 133 IPR011598 GO:0046983
Aed7g0496 248 CDD bHLH_AtORG2_like 76 143 - -
Aed7g0496 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 246 IPR015660 GO:0003700|GO:0006357
Aed7g0496 248 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0496 Aed-Chr7 3605280 3607488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0496 80 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 42.424 1.74e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g0496 HLH 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0496 - - gmx:100780888 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0496 7 3605280 3607488 Aed7g0496 7 3605280 3607488 ECH
Aed7g0496 7 3605280 3607488 Aed1g2201 1 18363467 18365681 PCT