Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0492 ATGACTTGCTGGCAGGATGTGCAGAGAAGAGAAAAGGCATTATATGACTTTTCGTTGTGTAGTCGTCCCAAATCCACGCAAGTAACTTCAAGGAAGCATCCATGGTCCAATCCATTTCATTACTCTAGTGTAAAACGTCAAACTGGTTACATGTCTCCAGAATATGCAATGTTTGGACAATTTTCAGAAAAATTAGATATTTTTAGTTTTGGAGTCATAGTTTTAGAGATTATTACCGGAAAAAAGAATCTAAGTTCTTATGAATCACATCATGTTATCGATGGTCTCTTGAGTCATAACTAG 303 0.3597 MTCWQDVQRREKALYDFSLCSRPKSTQVTSRKHPWSNPFHYSSVKRQTGYMSPEYAMFGQFSEKLDIFSFGVIVLEIITGKKNLSSYESHHVIDGLLSHN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0492 100 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0492 100 SUPERFAMILY Protein kinase-like (PK-like) 39 95 IPR011009 -
Aed7g0492 100 Pfam Protein tyrosine and serine/threonine kinase 44 94 IPR001245 GO:0004672|GO:0006468
Aed7g0492 100 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 49 99 - -
Aed7g0492 100 Gene3D Transferase(Phosphotransferase) domain 1 8 99 - -
Aed7g0492 100 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 49 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0492 Aed-Chr7 3551359 3556895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0492 49 99 Receptor kinase-like Gene Family AT4G23130 58.824 5.13e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed7g0492 PK_Tyr_Ser-Thr 2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0492 - - gmx:100810864 91.6633