Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0484 ATGTATATAGGACAAGCGTTGATGAAGATTAAGGCTTCATTCAGTAATGTAGCAGATGTTCTGCATGATTGGGATGATTTGCATAATGATGGCTTCTGTTCTTGGCGCGGAGTCTCGTGCGACAATGTCAGCCTTTCTGTGCTTTCTCTGAATTTGTCAAGCTTGAGCCTTGGTGGGGAGATATCACCAGCCATTGGTGACTTGGTAAACTTGCAATCCATAGACCTGCAGGGAAATAAACTAACTGGTCAAATTCCAGATGAAATTGGAAACTGTGCTGAACTTATTTATATGGATTTGTCCGATAATCAACTATATGGTGATATACCTTTCTCCATATCAAAGCTAAAGCAGCTTGTGTTTCTGAATTTAAAGAGTAATCAGTTGACTGGCCCTATCCCGTCAACATTAACCCAAATTCCAAACTTGAAGACTATTGATCTTGCACGAAATAGACTCACTGGTGAAATTCCCAGACTGCTCTATTGGAATGAAGTCTTGCAGTACCTGGGGTTGCGAGGGAACATGTTGAGTGGAACTCTGTCCTCTGATATCTGTCAATTGACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTGACTGGCACCATACCTGACAGCATTGGAAACTGTACAAATTTTGCAATCTTGGATCTCTCATATAATCAGATTTCTGGGGAGATTCCCTATAATATTGGATTTCTTCAAGTAGCTACTTTGTCACTTCAAGGAAATAGGCTAACCGGGAAGATTCCAGAAGTCATTGGTTTAATGCAAGCACTTGCTATTTTGGATTTGAGTGAGAATGAGCTAATAGGACCCATCCCTCCCATACTAGGAAATTTGTCTTATACTGGAAAGCTGTACCTTCATGGAAACATGCTTACTGGACCAATACCTCCTCAACTTGGCAATATGTCAAGACTAAGTTACCTGCAATTGCATAACAATCAACTAGTAGGTCAAATTCCTGATGAACTTGGGAAGCTTGAACATTTGTTTGAATTGAATCTTGCCAATAATCATCTTGAAGGATCTATTCCACTTAACATTAGTTCATGCACTGCATTGAATAAGTTTAATGTGCATGGAAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTAGCAGCCTTGAGAGCTTGACTTACCTAAATCTTTCTGCAAACAACTTCAAAGGGAGTATACCTGTTGAATTGGGCCATATAATAAATCTTGACACGCTGGATCTGTCTAGCAATAATTTTTCAGGGCATTTTCCAGGGTCTGTTGGTTATCTTGAGCATCTTCTGACCTTGAACTTGAGCCATAATGGTCTTCAGGGTCCCTTGCCTGGTGAATTTGGGAATCTTAGAAGCATACAGATTATTGATATGTCATTCAACTATCTATCGGGTAGCATCCCTCCAGAAATTGGTCAGCTGCAGAATCTTGTTTCTCTGTTTTTGAACAGCAACGATTTACATGGGAAGATTCCTGATCAGCTTACCAATTGCTTAAGTCTCAACTTCCTGAATGTCTCATACAATAACTTATCTGGGGTCATTCCTCTTATGAAGAACTTCTCCCGGTTTTCTGCTGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGTTAGGATCCATATGTGCTCCTGACATGCCAAAATCCAGAGGGCCACCCAAGCTTGTTATTCTTCACATGGGCTTGGCCATCCACACCTTTGATGATATTATGAGAGTTACTGAGAATCTCAATGAGAAGTATGTTGTAGGGTATGGTGCCTCTAGTACTGTGTACAAGTGTGCTTTAAAGAATTCCCGGCCAATTGCAATTAAACGACTATACAACCAGCATCCACACAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAGTATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTTTGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGAAAATCAATATTATCCAAGGCAGATAACAACACTATAATGGAGACAGTGGATCCTGAGGTGTCTATTACCTGCATGGATCTGAGCCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACAAAAAGAAATCCTTCCGAGAGGCCAACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTAATCCCAGCCCCTCACAATAAAAATATCTTTGCTGTCCCTTCTTCAAAGACCATTGATTATGCACAATTTGTGATTCAAAAGGGAAACAAAAACAACCTCCTCCAACCCCCACAAATGGATAGGCTACAACCTCAGCAGCAGTTCTCTAATAATCAATGGTTTGTTCGCTTTGAGGATGTAGTATCAAATAACAGCATCTAG 2385 0.4034 MYIGQALMKIKASFSNVADVLHDWDDLHNDGFCSWRGVSCDNVSLSVLSLNLSSLSLGGEISPAIGDLVNLQSIDLQGNKLTGQIPDEIGNCAELIYMDLSDNQLYGDIPFSISKLKQLVFLNLKSNQLTGPIPSTLTQIPNLKTIDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSSDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFAILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELIGPIPPILGNLSYTGKLYLHGNMLTGPIPPQLGNMSRLSYLQLHNNQLVGQIPDELGKLEHLFELNLANNHLEGSIPLNISSCTALNKFNVHGNHLSGSIPLSFSSLESLTYLNLSANNFKGSIPVELGHIINLDTLDLSSNNFSGHFPGSVGYLEHLLTLNLSHNGLQGPLPGEFGNLRSIQIIDMSFNYLSGSIPPEIGQLQNLVSLFLNSNDLHGKIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSRFSADSFIGNPLLCGNWLGSICAPDMPKSRGPPKLVILHMGLAIHTFDDIMRVTENLNEKYVVGYGASSTVYKCALKNSRPIAIKRLYNQHPHNSREFETELETIGSIRHRNLVTLHGYALTPNGNLLFFDYMENGSLWDLLHGKSILSKADNNTIMETVDPEVSITCMDLSHVKKTFQLALLCTKRNPSERPTMHEVARVLASLIPAPHNKNIFAVPSSKTIDYAQFVIQKGNKNNLLQPPQMDRLQPQQQFSNNQWFVRFEDVVSNNSI 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0484 794 ProSitePatterns Protein kinases ATP-binding region signature. 586 608 IPR017441 GO:0005524
Aed7g0484 794 Gene3D Ribonuclease Inhibitor 4 165 IPR032675 -
Aed7g0484 794 Gene3D Transferase(Phosphotransferase) domain 1 653 743 - -
Aed7g0484 794 Pfam Protein kinase domain 583 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0484 794 Pfam Leucine rich repeat 70 129 IPR001611 GO:0005515
Aed7g0484 794 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Aed7g0484 794 Pfam Leucine Rich repeat 212 228 IPR001611 GO:0005515
Aed7g0484 794 SMART LRR_typ_2 140 164 IPR003591 -
Aed7g0484 794 SMART LRR_typ_2 379 403 IPR003591 -
Aed7g0484 794 SMART LRR_typ_2 188 212 IPR003591 -
Aed7g0484 794 SMART LRR_typ_2 68 92 IPR003591 -
Aed7g0484 794 SMART LRR_typ_2 475 499 IPR003591 -
Aed7g0484 794 SMART LRR_typ_2 427 450 IPR003591 -
Aed7g0484 794 SMART LRR_typ_2 307 330 IPR003591 -
Aed7g0484 794 SMART LRR_typ_2 331 355 IPR003591 -
Aed7g0484 794 Gene3D Phosphorylase Kinase; domain 1 559 652 - -
Aed7g0484 794 SUPERFAMILY RNI-like 73 516 - -
Aed7g0484 794 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 669 758 - -
Aed7g0484 794 Gene3D Ribonuclease Inhibitor 239 548 IPR032675 -
Aed7g0484 794 Gene3D Ribonuclease Inhibitor 166 238 IPR032675 -
Aed7g0484 794 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 553 - -
Aed7g0484 794 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 553 668 - -
Aed7g0484 794 ProSiteProfiles Protein kinase domain profile. 580 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0484 794 SUPERFAMILY Protein kinase-like (PK-like) 557 672 IPR011009 -
Aed7g0484 794 Pfam Leucine rich repeat N-terminal domain 4 41 IPR013210 -
Aed7g0484 794 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 4 553 - -
Aed7g0484 794 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 669 758 - -
Aed7g0484 794 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 553 668 - -
Aed7g0484 794 SUPERFAMILY RNI-like 240 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0484 Aed-Chr7 3459461 3465483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0484 670 794 Receptor kinase-like Gene Family AT5G07180 48.000 5.28e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Aed7g0484 Pkinase 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0484 K20718 - gmx:100800185 1228.77