Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0475 ATGGACCGGACGGCAAGGTGGCGCTGTCGCCGATGCCGATATCAGCGTCGATTCCGTGATGGAATTGCATACTCAGTTGGTGCCAATTTCACACCTCACATCCTTACAGTAAATGATGGCGAGGATGTTACTATGAAGATTATGTCCTCTCAACATGGATGTCGAGCAATTTGCATTCTGTCTGCAAATGGCACGATTTCAAATGTTACACTACGCCAACCAACTTCATCAGGTGGTACTTTAACATATGAGGGGCGGTTTGAAATTCTTTCCTTGTCTGGTTCATATATAACAACTGAGAATGGATTAACAAAAAGCAGATCTGGTGGGATGAGCATCTCTTTGGCCGGGCCAGATGGTCGAGTAATGGGGGGCGGATTGGCTGGTTTGCTGGTAGCAGCAGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTCTTCCTGGCCACCAGCTGGAGCAGCAGAAAGTGAAGAAGCCGAGGGTGGAGCATAACATATCAATGGCTGCCGCCCCTACACATCATCATGTCATCCCTACTCCTGCTGAAGAAATAAGAATTGGTCTTAGTGGAGTGAAGCCAATCATGATGACACCAGCTGCTTTTCAAGTGGACCACATTTTTGGCAATGGTCAAAGCTCTGGAAACTCACCATCTGATGATGAGGATGATGATGAGGATGAAGCTCCTTTCCCTGAAGAAAATGAGTCTAACCCCAGCCATGCAGATGCATGCTAA 732 0.474 MDRTARWRCRRCRYQRRFRDGIAYSVGANFTPHILTVNDGEDVTMKIMSSQHGCRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEQQKVKKPRVEHNISMAAAPTHHHVIPTPAEEIRIGLSGVKPIMMTPAAFQVDHIFGNGQSSGNSPSDDEDDDEDEAPFPEENESNPSHADAC 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0475 243 SUPERFAMILY AF0104/ALDC/Ptd012-like 29 146 - -
Aed7g0475 243 MobiDBLite consensus disorder prediction 205 243 - -
Aed7g0475 243 ProSiteProfiles PPC domain profile profile. 27 170 IPR005175 -
Aed7g0475 243 Pfam Plants and Prokaryotes Conserved (PCC) domain 32 144 IPR005175 -
Aed7g0475 243 Gene3D - 32 166 - -
Aed7g0475 243 MobiDBLite consensus disorder prediction 216 231 - -
Aed7g0475 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 17 221 IPR039605 GO:0003680
Aed7g0475 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 17 221 - -
Aed7g0475 243 CDD DUF296 31 144 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0475 Aed-Chr7 3381434 3386080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0475 21 160 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 72.340 3.75e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0475 - - gmx:100803208 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1983 8 24327687 24333637 Aed7g0475 7 3381434 3386080 ECH
Aed7g0475 7 3381434 3386080 Aed7g0475 7 3381434 3386080 ECH
Aed7g0475 7 3381434 3386080 Aed8g1983 8 24327687 24333637 PCT