Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0451 ATGGCTGTGTCACTGTGGAGAAGTCGCACTGCTTCATCAGCACTGAACTTGTTCACCAATGCTCTTCGCCGTCTCTCTTCTGAGGCAACAAATGCCAGTCCTCATAGTACACGAGAGAGTGTGATGAGTCAAATGATGTATTCTGACATAAACTCGCGAATTGGGAGTTGCATGCCACTGTCTGCAATGCGCATTGGAACAATCATTCACAACATTGAGTTGAACCCTGGGCAAGGTGGCAAGCTCGTCCGAGCTGCTGGAACTAGTGCAAAGATCTTGAAAGAGCCAACGTCGGCATACTGTTTAATCCAACTTCCCTCGGGTGTTAAAAAGTTGGTTGATTCTCGGTGTAGGGCCACTGTTGGTGTTGTGTCTAATCCAAGCCATGGGGATCGCAAGCTTAGGAAGGCCGGACACAGCCGATGGCTTGGTCGAAGACCAGTTGTCCGAGGAGTGGCAATGAATCCAATAGATCATCCTCATGGTGGAGGAGAGGGTAGGAGCAAGGGTGGTGGACGATTTGGGCGAGGATCTCTCACTCCTTGGGGCAAGCCAACTAAGAGTGGCTTTAAGACTGGACCCTTGAAGCGCAGAAAGTAG 600 0.5033 MAVSLWRSRTASSALNLFTNALRRLSSEATNASPHSTRESVMSQMMYSDINSRIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRAAGTSAKILKEPTSAYCLIQLPSGVKKLVDSRCRATVGVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPIDHPHGGGEGRSKGGGRFGRGSLTPWGKPTKSGFKTGPLKRRK 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0451 199 Gene3D - 48 124 IPR014722 -
Aed7g0451 199 MobiDBLite consensus disorder prediction 153 199 - -
Aed7g0451 199 Gene3D Ribosomal protein L2, domain 3 125 199 IPR014726 -
Aed7g0451 199 TIGRFAM rplB_bact: ribosomal protein uL2 40 195 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Aed7g0451 199 ProSitePatterns Ribosomal protein L2 signature. 147 158 IPR022671 GO:0003735|GO:0005840|GO:0006412
Aed7g0451 199 Pfam Ribosomal Proteins L2, C-terminal domain 54 183 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aed7g0451 199 SMART Ribosomal_L2_C_2 52 185 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aed7g0451 199 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 37 199 - -
Aed7g0451 199 PANTHER RIBOSOMAL PROTEIN L2 37 199 IPR002171 GO:0003735|GO:0005840|GO:0006412
Aed7g0451 199 SUPERFAMILY Translation proteins SH3-like domain 54 188 IPR008991 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0451 44 170 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 40.000 4.43e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0451 - - gmx:100792418 361.688