Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0444 ATGGATTTTGCATATTCCCATTTTGCCCCTTTCTCACTGTACTTGTGCTGCTTCTATAATTCCCTCTCATTCCATTCCGCTAAGTATGCCTTTGAAGGAATCAAAGTACCTTTGACTAGTCCTTCTTTTCAGTTCTTTAAAATATTGCAATTTGATAATGTTGGGATTGTCCAAAATCCTGAGCAGACACGTTTTGGATCTGTATTCAACAAGTTGGTGAAGGAGCTTGGTGAACCTGTTGACTTTGAACTTCCAGATTGGTTCAATAAATCAAAGCCAATGCAGTACAATTATATAAAACGCAATATATATCTCACTAAGAAGGTCAAGAGATCCCGGTTTGATGATGATGGCATATTCTGTTCCTGTGCTACTTCCCCTGGATCTACTAGTGTATGTGGTCGAGATTGCCACTGTGGAATGCTTCTGTCTAGCTGTTCATCAGGCTGTAAATGTGGGAGCTCCTGTCTCAACAAACCATTTCAGAGTCGTCCTGTGAAAAAGATGAAATTGATCAAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCTTGGGGAGTTTGTCATTGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAGGAAAGGCTTTGGAACATGAAACATCGTGGGGAAACAAACTTCTACTTATGTGAAATCAATCGAGACATGGTGATAGATGCAACATATAAGGGAAACAAATCAAGATACATCAATCATAGTTGCTGCCCCAATACTGAGATGCAGAAATGGTTGACTACTAATTGTTTTATTCTTACGATGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCGTGATATACAAAAGGGAGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTGAGTGTAGGCGTAAGTTGGGTGTCCGACCTACCAAGCCTAAACTTTCTTCAGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAGAATGGAGGTTTGCAAATTGGAAGTTCTCATGTTGTTGGCCAACCAAAGTGCTTACACAATTGCATTGGTGAAGTTATTAGGATAAAACAGCTTGAAAATGAGAGGTTTGGAATTATTAAACGGTTTGATAAATATTCCCGGAAACACACTATCATGTTTGAGGATGGTTGTCTTGAAATTTATGACATGTCAAAAGAGGACTGGGAACTTGTGAGATGGTGA 1239 0.3898 MDFAYSHFAPFSLYLCCFYNSLSFHSAKYAFEGIKVPLTSPSFQFFKILQFDNVGIVQNPEQTRFGSVFNKLVKELGEPVDFELPDWFNKSKPMQYNYIKRNIYLTKKVKRSRFDDDGIFCSCATSPGSTSVCGRDCHCGMLLSSCSSGCKCGSSCLNKPFQSRPVKKMKLIKTEKCGSGIVADEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWLTTNCFILTMIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAAECRRKLGVRPTKPKLSSDAALKLVAYQVYQNGGLQIGSSHVVGQPKCLHNCIGEVIRIKQLENERFGIIKRFDKYSRKHTIMFEDGCLEIYDMSKEDWELVRW 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0444 412 ProSiteProfiles SET domain profile. 167 294 IPR001214 GO:0005515
Aed7g0444 412 SMART PostSET_3 300 316 IPR003616 -
Aed7g0444 412 Pfam SET domain 178 293 IPR001214 GO:0005515
Aed7g0444 412 ProSiteProfiles AWS domain profile. 116 165 IPR006560 GO:0005634|GO:0018024
Aed7g0444 412 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 89 354 IPR025787 -
Aed7g0444 412 SUPERFAMILY SET domain 78 306 IPR046341 -
Aed7g0444 412 CDD SET_ASHR3-like 168 316 - -
Aed7g0444 412 SMART shorttest3 116 166 IPR006560 GO:0005634|GO:0018024
Aed7g0444 412 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 65 409 - -
Aed7g0444 412 ProSiteProfiles Post-SET domain profile. 300 316 IPR003616 -
Aed7g0444 412 SMART set_7 167 300 IPR001214 GO:0005515
Aed7g0444 412 PANTHER SET DOMAIN PROTEINS 65 409 - -
Aed7g0444 412 Gene3D SET domain 85 331 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0444 Aed-Chr7 3212182 3219495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0444 140 312 C2H2 Transcription Factor Family AT2G23740 33.862 4.76e-22 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed7g0444 SET 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0444 - - gmx:100808183 676.781