Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0429 ATGGATGGAGGAGAAGATGGTGTAAACTGCAGTGATTATGAGCATGACATAGAAAATGAAGGTTTGTGGGATGGGAATGCAGAAATTGGAAGGTACTGGTCAGGGTTATCTGACAAAAACATGGCTAATAGTCATACAAAGCCACTTCTTGTGAAGAGGACTAACACCACCTCCCAGATTGCTATAGTTGGTGCCAACCTCTGCCCTATTGAAAGCCTTGACTATGAATATATTGATGCTTTTTTAGCATATGCTGGTGCGAATATGTGTTTAGCAGCAGCAGCTGCTGCACTTTGTGCTTTCATTGCTCCAGCAGCTGCAGGCTCTGGCATTCCAGAGGTAAAAGCATATCTCAATGGCGTGGATGCTCACTATATATTGGCTCCAAGCACTCTTTTGGTAAAGATATTTGGTTCCATCCTTGGAGTTTCTGCTGGTTTTGTTGTGGGCAAAGAGGGACCTATGGTACATACAGGTGCATGCATAGCTTCTTTATTGGGGCAGGGTGGATCTACTAAGTATCACTTGAATTGCACTTGGCTTAGATATTTCAAAAATGACAGAGACCGGCGAGACATGATTACTTGTGGTGCAGCAGCTGGTGTTGCTGCTGCCTTTCGTGCACCAGTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGCGAAATGCTCTTCTTTGGAGGACATTTTTTACAACAGCAGTGGTTGCTATTGTTATAAGAGTTGGAATTCAGTTTTGTGCCACAGGGAAATGTGGGTTATTTGGGGAAGGTGGTCTAATAATGTATGACGTTAGTTCAGCCAATATAACATATAGTGCTAGTGGGATATTTGCAGTACTACTTATGGGAGCAATTGCTGGAATTCTTGGAAGCATATATAATTTTCTTGTAGATAAGGTTGTTCGGACATATAGCATCATCAATGAAAAAGGTGCATTTTCCAAAATCTCTCTTGTTGTCACTATTGCTCTTTTGACATCATGTTGTTACTATTTCTTGCCATGGATAGCATACTGCACTCCCTGCCCTTCAAATTCGACAATAATCTGTCCCTCTGTTGATGAGTCTGGAGAATACAAAAGCTTTCAATGCCCACCAGGCTACTACAGTGATCTTGCTTCCCTCTTTCTAAACACAAATGACGATGCTATTCGAAATCTATTCAGCCCCAGGATAATCAAAGAGTTTCATATTTCCAGTTTGTTTATCTACTTTGCAACTATTTACTTTCTTGGAATAATCACTTATGGCATTGCTATTCCATCCGGGCTCTTCATTCCTGTCATACTTGCTGGTGCTGCCTATGGTCGGCTTTTTGGCCGGCTCTTCGAAACAACCACCGAACTCGACAGAGGACTCTTTGCCCTCCTTGGAGCTGCTTCCTTCCTTGGTGGCACCATGAGAATGACAGTGTCTCTTTGTGTCATATTGCTTGAGCTCACTAATGATCTCTTGTTACTTCCACTTGTGATGTTGGTCTTGTTGGTCTCAAAAACTGTGGCTGACAGCTTCAACAAGAGTGTCTATGATCAAATACTCAAGATCAAAGGACTTCCTTATTTGGAGGCTCATGCAGAACCTTACATGAGTAGTTTAGTTACGCGCGATGTTGTTTCAGGTCCTCTGATAACCTTTTCCGGCATTGAAAATGTTGGGAATTTATTTCATGCGTTGAATACTACAGGCCATAACGGGTTTCCTGTCATTGATGAACCACCTTTCTCAGATGCACCAGAGTTATGTGGCCTTGTACTGAGGTCTCATTTACTAGTGTTACTGAAGGAGAAGATTTTTTTAAGAGATAGGGATTTTGCAAATCAAAGGGTCTTCCAAAGAATTTCTACTTTGGATTTTGGAAAGGCAGGATCAGGAAAAGGGATCGAAATAGAGGATCTTGATATTAAAGAGGAAGAGATGGATATGTATGTTGATCTCCATCCCATAACTAATTCATCTCCTTACACTGTGGTTGAGACAATGTCACTTGCCAAAGCTGCTATTCTTTTCCGCCAACATGGACTCAGGCACATGTGTGTTGTTCCAAAGAGCCAAGGGAGACCTCCAGTTGTTGGGATTCTAACACGCCATGATTTTATGCCAGAGCATGTTTTGGGACTTTACCCTGATATCAAGCTTCACAAAAGGCAATGA 2163 0.423 MDGGEDGVNCSDYEHDIENEGLWDGNAEIGRYWSGLSDKNMANSHTKPLLVKRTNTTSQIAIVGANLCPIESLDYEYIDAFLAYAGANMCLAAAAAALCAFIAPAAAGSGIPEVKAYLNGVDAHYILAPSTLLVKIFGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSTKYHLNCTWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALLWRTFFTTAVVAIVIRVGIQFCATGKCGLFGEGGLIMYDVSSANITYSASGIFAVLLMGAIAGILGSIYNFLVDKVVRTYSIINEKGAFSKISLVVTIALLTSCCYYFLPWIAYCTPCPSNSTIICPSVDESGEYKSFQCPPGYYSDLASLFLNTNDDAIRNLFSPRIIKEFHISSLFIYFATIYFLGIITYGIAIPSGLFIPVILAGAAYGRLFGRLFETTTELDRGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLLLPLVMLVLLVSKTVADSFNKSVYDQILKIKGLPYLEAHAEPYMSSLVTRDVVSGPLITFSGIENVGNLFHALNTTGHNGFPVIDEPPFSDAPELCGLVLRSHLLVLLKEKIFLRDRDFANQRVFQRISTLDFGKAGSGKGIEIEDLDIKEEEMDMYVDLHPITNSSPYTVVETMSLAKAAILFRQHGLRHMCVVPKSQGRPPVVGILTRHDFMPEHVLGLYPDIKLHKRQ 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0429 720 CDD CBS_pair_voltage-gated_CLC_euk_bac 539 705 - -
Aed7g0429 720 PRINTS Chloride channel signature 512 526 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aed7g0429 720 PRINTS Chloride channel signature 104 121 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aed7g0429 720 PRINTS Chloride channel signature 135 154 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aed7g0429 720 PRINTS Chloride channel signature 456 472 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aed7g0429 720 PRINTS Chloride channel signature 199 218 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aed7g0429 720 PRINTS Chloride channel signature 474 493 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aed7g0429 720 PRINTS Chloride channel signature 424 444 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aed7g0429 720 PRINTS Plant CLC chloride channel signature 376 392 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aed7g0429 720 PRINTS Plant CLC chloride channel signature 252 259 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aed7g0429 720 PRINTS Plant CLC chloride channel signature 220 228 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aed7g0429 720 PRINTS Plant CLC chloride channel signature 234 244 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aed7g0429 720 SUPERFAMILY CBS-domain pair 529 703 IPR046342 -
Aed7g0429 720 Gene3D - 535 707 IPR046342 -
Aed7g0429 720 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 40 79 - -
Aed7g0429 720 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 77 718 - -
Aed7g0429 720 ProSiteProfiles CBS domain profile. 652 714 IPR000644 -
Aed7g0429 720 Pfam CBS domain 654 702 IPR000644 -
Aed7g0429 720 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 40 79 - -
Aed7g0429 720 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 77 718 - -
Aed7g0429 720 Gene3D Clc chloride channel 55 526 - -
Aed7g0429 720 SUPERFAMILY Clc chloride channel 79 528 IPR014743 -
Aed7g0429 720 Pfam Voltage gated chloride channel 92 506 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0429 Aed-Chr7 3144682 3149302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0429 73 714 Ion Channels AT5G49890 72.473 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0429 K05016 - gmx:100777170 1108.2