Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0428 ATGTTCAAGGGTTCAACATTGCATTTGATCTTAAGATCCCAATGGAAAATCCAAGCCTACCAACCATATATTGTTTTATTTGTAGCAGCTGCAGTGAGACGACAACAACAACAACAAAAACTGGCTCATGTTTACGTGCATCCCACGTCTCTGATTCTCACTTTCCGCTGGCGCAGTCATTATCTCCGCCGCCGTGACGCTCCATCCCTAAACGCCGCACACAAGATTTCTGTCATCTCACTCATGGCAACTAGACTTCAGTTTGAAAATAATTGTGAAATTGGAGCCTTCTCTAAACTTACCAATGCCTACTGTTTGGTTGCCATTGGAGGCTCTGAAAACTTCTACAGTGTATTTGAAGCTGAGTTAGCAGATGTTATCCCTGTGGTCAAGACATCCATTGCTGGTATTCGTGTTATTGGTCGTCTTTGTGCTGGAAACAAGAATGGTCTTCTCTTGCCCCATACCACCACAGACCAAGAACTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGTATAGAAGAAAGGTTATGTTCTCTGGGAAATTGTATAGCAAGTAATGACCATGTGGCTCTCGCTCACACTGATCTTGACAGGGAGACTGAAGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCATGCCATTGCTGATAACATTATGGTTGGTAGTTACTGTGCCTTCTCCAATAGGGGTGGTTTGGTCCACCCTCATACTTCCATAGAAGACTTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTGTCAGGGACTGTGAACCGTGGTAGTGATTTAATAGCGTCTGGAATGATAGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACAGAGCTATCTGTAATTGAGAGTGTTTTCAAGCTAAGAGAAGCACAGCCTAGTGCCATTGTGGATGAGATGAGGAAATCCCTCATTGATACCTATATCTTCCTATTTGATTACTTGGGTCAAAGACTTCTGTCATTCTCAATCATGGCAACTAGACTTCAGTTTGAAAATAATTGTGAAGTTGGAGTCTTCTCTAAACTGACCAATGCTTACTGTTTGGTTGCCATTGGAGGTTCTGAAAGCTTCTACAGTGTATTTGAATCTGAGTTAGCAGATGTTATCCCTGTGGTCAAGACATCCATTGGTGGTACTCGAATTATTGGTCGTCTTTGTGCTGGAAACAAGAATGGGCTTCTCTTGCCCCATACCACCACAGACCAAGAACTTCAACAGTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGAATAGACGAAAGATTATCTGCTCTGGGAAATTGTATCGCATGTAATGACCATGTGGCCCTCACACACACTGATCTTGACAAGGAGACTGAAGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACCATTGCTGGTAATATTCTTGTTGGTAGTTACTGTGCCTTCTCCAATAGAGGTGGTTTGGTTCACCCTCATACTTCCATAGAAGACCTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTGGCTGGGACTGTGAACCGTGGTAGTGAAGTAATAGCGGCTGGAATGACAGTTAATGATTGGACCGCATTTTGTGGTTCAGACACCACAGCAACAGAGCTATCTGTAATTGAGAGTGTTTTCAAGCTGAGAGAAGCACAGCCTAGTGCAATTGTGGATGAGATGAGGAAATCCCTCATCGATACCTATGTCTGA 1761 0.4304 MFKGSTLHLILRSQWKIQAYQPYIVLFVAAAVRRQQQQQKLAHVYVHPTSLILTFRWRSHYLRRRDAPSLNAAHKISVISLMATRLQFENNCEIGAFSKLTNAYCLVAIGGSENFYSVFEAELADVIPVVKTSIAGIRVIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLCSLGNCIASNDHVALAHTDLDRETEEMIADVLGVEVFRHAIADNIMVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVSGTVNRGSDLIASGMIVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDTYIFLFDYLGQRLLSFSIMATRLQFENNCEVGVFSKLTNAYCLVAIGGSESFYSVFESELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQQLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDTYV 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0428 586 SUPERFAMILY Pentein 82 305 - -
Aed7g0428 586 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 342 586 - -
Aed7g0428 586 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 82 331 - -
Aed7g0428 586 TIGRFAM eIF-6: putative translation initiation factor eIF-6 345 565 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 TIGRFAM eIF-6: putative translation initiation factor eIF-6 85 305 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 SMART eIF6neu2 344 545 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 SMART eIF6neu2 84 285 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 CDD IF6 343 564 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 82 331 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 342 586 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 Hamap Translation initiation factor 6 [eif6]. 71 326 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 Hamap Translation initiation factor 6 [eif6]. 331 586 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 Gene3D - 342 566 - -
Aed7g0428 586 Gene3D - 82 306 - -
Aed7g0428 586 CDD IF6 83 304 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 Pfam eIF-6 family 345 544 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 Pfam eIF-6 family 85 284 IPR002769 GO:0042256|GO:0043022
Aed7g0428 586 SUPERFAMILY Pentein 342 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0428 Aed-Chr7 3133535 3141850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0428 342 586 Eukaryotic Initiation Factors Gene Family AT3G55620 93.061 8.93e-170 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0428 K03264 - tut:107362863 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0428 7 3133535 3141850 Aed8g1958 8 24133504 24135947 PCT