Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0410 ATGAGCTTGGCCTTTAACATAGGCTTTTTTTATGTTGTCTTGTTTGTGTCATTCAAATTCAACATGGTCTTGTGTACTGAAATTGAGGAATACTATCCAGAAGAAAGAGATGCTTTGATTCTCATAAGGGATTCTTTGAATTCTTCTCTCAATTTGCATGGGAATTGGACAGGCCCTCCTTGCATAGACAATCATAGCAGATGGATTGGTATCAATTGTTCAAATTGGCATGTTGTTCAAATTGTTCTTGAAGGAGTTGACCTTAGTGGTTATTTACCTCCCACATTCCTTCTTAACATAACTTTCTTGAGCCAACTTGACTTCAGAAACAATGCACTTTCTGGACCACTGCCAAGCCTCAAGAATTTGATGTTTTTGGAACAGGTCCTATTATCATTCAATCACTTCACAGGGTCAATTCCTCTGGAGTATGTTGAAATTCCTAGTCTACAAGTGTTGGAGCTGCAAGAGAATTACTTAGATGGTCAAATTCCATCCTTTGATCAACCATCATTGACAAGTTTCAACGTGTCATATAATCATCTGTCAGGGCCAATTCCTGAAACTTCTGTGCTGCAAAGGTTCCCAGAGAGTTCATATGGTAATAATTCAGATCTTTGTGGAGAGCCATTGGATAAGTTATGTCCTGTTGAACCTCCTGCCCCATCTCCATCTCCATTTTATGCACCACCTCCTTCTGTTTTTCCTCCAATCCCAGCACTGAAGCCAAATAAGAAGAGGTTTCACGCATGGATTGTTGCTGTAATTGGTGCTGCATCTGCACTGATTCTTTTGTCTCTGATCATTGTTATTGCTTTCTTGTTTCGTAAAAGACGAACAAGTGGAAAAGAATCAACAAGAAATGATTCAGCAGGGTATGTTTTTGGGGCATGGGCAAAAAAGATGGTGTCTTATGCTGGGAACAGTGATGCTTCTGAAAGATTAGGCAAATTGGAATTTTCCAACAAGAAATTGCCAGTTTTTGACTTGGATGATTTATTGAGGGCGTCAGCAGAAGTGCTTGGAAGAGGGAACTTAGGCATTACATACAAAGCAACACTTGAAACAGGAACTGTTGTTGCAGTAAAGAGACTTAACTACATGAATGAACTGAGCAAGAAGGAATTTCTGCAGCAGATGCAATTGCTTGGCCAGATGAAGCATGAAAATCTAGTAGAAATAATCTCCTTTTATTATTCAGAGGAGCAAAAGTTTGTCATATATGAATTTTGCTCTGATGGCACTTTGTTTGAACTCCTACATGAGGGTAGAGGAGTTGGAAGAATGCCACTTGATTGGACCACAAGACTTTCCATCATCAAAGATATAGCAAAGGGTCTTGTTTTCCTTCATCATTCTTTGCCTCAACACAAGGTCCCTCATGCCAATCTCAAATCATCAAATGTTCTAATCCATCAAGATAGTAAAGGTTACCATTCCAAGCTCACAGACTATGGTTTCTTGCCTCTACTCCAAGCCAAACAGAATGCAGAAAAACTTGCCATAAGGAGGTCACCAGAATTTGTTAAAGGGAAGAAGCTGACACACAAAGCTGATGTCTATTGCTTTGGCATCATTATGCTAGAGATTATAACTGGCAGAATCCCTGGTCATATCTTAGGTGAAATTGAAGAAACAACCAATGATCTTTCAGATTGGGTGAGAACTGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAAATACTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAAGCTGACAGAGTTAGCTCTAGAGTGTACAGATATGACACCAGAGAATCGGCCTAATATGAGTGTAGCATTGGTGAGAATAGAAGAGATAGAGCAAATGAGAATAGAAGAGAATGAGTAA 1866 0.3934 MSLAFNIGFFYVVLFVSFKFNMVLCTEIEEYYPEERDALILIRDSLNSSLNLHGNWTGPPCIDNHSRWIGINCSNWHVVQIVLEGVDLSGYLPPTFLLNITFLSQLDFRNNALSGPLPSLKNLMFLEQVLLSFNHFTGSIPLEYVEIPSLQVLELQENYLDGQIPSFDQPSLTSFNVSYNHLSGPIPETSVLQRFPESSYGNNSDLCGEPLDKLCPVEPPAPSPSPFYAPPPSVFPPIPALKPNKKRFHAWIVAVIGAASALILLSLIIVIAFLFRKRRTSGKESTRNDSAGYVFGAWAKKMVSYAGNSDASERLGKLEFSNKKLPVFDLDDLLRASAEVLGRGNLGITYKATLETGTVVAVKRLNYMNELSKKEFLQQMQLLGQMKHENLVEIISFYYSEEQKFVIYEFCSDGTLFELLHEGRGVGRMPLDWTTRLSIIKDIAKGLVFLHHSLPQHKVPHANLKSSNVLIHQDSKGYHSKLTDYGFLPLLQAKQNAEKLAIRRSPEFVKGKKLTHKADVYCFGIIMLEIITGRIPGHILGEIEETTNDLSDWVRTVVNNDWSTDILDLEILAEKEGHDAMLKLTELALECTDMTPENRPNMSVALVRIEEIEQMRIEENE 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0410 621 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 614 - -
Aed7g0410 621 Gene3D Phosphorylase Kinase; domain 1 301 410 - -
Aed7g0410 621 Gene3D Ribonuclease Inhibitor 32 217 IPR032675 -
Aed7g0410 621 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 12 614 - -
Aed7g0410 621 ProSiteProfiles Protein kinase domain profile. 335 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0410 621 Pfam Protein kinase domain 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0410 621 Gene3D Transferase(Phosphotransferase) domain 1 412 621 - -
Aed7g0410 621 SUPERFAMILY Protein kinase-like (PK-like) 339 608 IPR011009 -
Aed7g0410 621 SUPERFAMILY L domain-like 32 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0410 Aed-Chr7 2976518 2978794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0410 35 613 Receptor kinase-like Gene Family AT1G48480 35.873 1.66e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed7g0410 Pkinase 2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0410 - - gmx:100788386 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0410 7 2976518 2978794 Aed7g0410 7 2976518 2978794 ECH