Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0404 ATGTCAACACCTCCTCAAGTCATCACCTGCAAAGCTGCAGTGGCATGGGGAGCAGGGGAACCATTGGTGATGGAGGAAGTGGAACTGAGTCCTCCCCAACCAATGGAGATTAGGATTAAGGTTGTCTCCACCTCTCTCTGTCGCAGTGATCTCTCCGCTTGGGAATCTCATGCCATATTTCCTCGCATATTTGGCCACGAAGCATCAGGTATTGTTGAGAGTGTGGGACAGGGAGTGACTGAATTCATAGAAGGGGACCACGTGCTAACAGTCTTCATTGGAGAATGCATGGAATGCAGGCAGTGCACATCTGGAAAAAGTAACACTTGTCAAGTTTTGGGGTTGGAAAGGAGGGGTTTAATGCATAGTGATCAGAAGACACGCTTCTCAATAAAAGGGAAGCCTGTTTTCCATTACTGTGCTGTTTCAAGTTTCAGTGAATATACAGTAGTCCATTCTGGATGTGCAGTGAAAGTCAGCCCCCTCGCACCTCTTGAGAAAATATGCCTTCTGAGCTGTGGAGTTGCTGCAGGTCTGGGAGCAGCATGGAATGTTGCAGATGTGTCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTTGGCCTATCTGTTGCTCAAGCTGCCAAACTAAGAGGTGCATCTCAAATAATTGGTGTGGACATCAATCCACAGAAGTGTGAAAATGCTAAAGCTTTTGGGGTTACTGAAGTTGTTGACCCAAATTCCTATAAAGAACCTATTGCTCAGGTTGTTAAGCACATGACTGATGGTGGGGCAGATTTCTCGTTCGAATGTGTAGGTGACACTGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTAACACTTGGTGTGCCAAAAGTGAAGCCTGAGATGTCAGCTCATTATGGACTACTCCTAATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCTAAATCTGATCTTCCTTCATTAGTAGAGAAGTATGTCAACAAGGAAATTCAGATTGATGACTACATAACACACAATTTGCCATTTGATGACATTAACAAAGCTTTCAATCTCATGAAGGAAGGGAAGTGTCTGCGTTGCGTTATCCACATGCCAAGATAA 1128 0.445 MSTPPQVITCKAAVAWGAGEPLVMEEVELSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGQGVTEFIEGDHVLTVFIGECMECRQCTSGKSNTCQVLGLERRGLMHSDQKTRFSIKGKPVFHYCAVSSFSEYTVVHSGCAVKVSPLAPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQAAKLRGASQIIGVDINPQKCENAKAFGVTEVVDPNSYKEPIAQVVKHMTDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYVNKEIQIDDYITHNLPFDDINKAFNLMKEGKCLRCVIHMPR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0404 375 CDD alcohol_DH_plants 8 372 - -
Aed7g0404 375 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 4 373 - -
Aed7g0404 375 Gene3D - 178 316 - -
Aed7g0404 375 Gene3D - 13 368 - -
Aed7g0404 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 337 IPR036291 -
Aed7g0404 375 SUPERFAMILY GroES-like 3 183 IPR011032 -
Aed7g0404 375 SUPERFAMILY GroES-like 324 372 IPR011032 -
Aed7g0404 375 Pfam Alcohol dehydrogenase GroES-like domain 35 158 IPR013154 -
Aed7g0404 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 65 79 IPR002328 GO:0008270|GO:0016491
Aed7g0404 375 PANTHER ALCOHOL DEHYDROGENASE 4 373 - -
Aed7g0404 375 Pfam Zinc-binding dehydrogenase 202 325 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0404 Aed-Chr7 2917412 2921860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0404 13 110 Monolignol Biosynthesis Gene Families AT2G21730 35.238 1.39e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0404 K00001 - gmx:100819938 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0404 7 2917412 2921860 Aed7g0404 7 2917412 2921860 ECH