Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0400 ATGGAACAAACAGCGTGCGAGGAGTTGCTGAAAAATGCTTCGGATTTCAAGTGCGAGAAGGTTCTCGAAACAGTTGATGAATCAATCGTATGCCCCACTCCACAAAAGAACGCGGAACCCTTAACCGTCAAATTCAGAGAGGGACAAATCAATCTTCCTGAAAAGAAATTCTCCCATGCCCATGTTGCGCAGATGAAGTATATACTCCCTGAAAGTGTGTGTATAGATAAGGTGCTTGTTCATGATGAGAAAAGCTTGTGTATGGTGCCCGATATGAAGATCACCCTGAGATTTGAGGTTGTGAAAGATTACTCTGGTGAATCGGCTGTTCTGGCCCTTCGGAGATATTTTAAATCTAAGCTGATTGATTTCTTTGATATGCATCCTGAGATTCACATATCACATATTGAAGAATTTACTGGCCAATCCCTGCATGTAAATTCTTCAACGGAAGTTTTGTCAATTTCCAATCAAACCGAAATGTTGCCAGAGCAATTGCAATTGTATCCAACTAGACACTTTTCTCGGAAGAATAATACCGACCTGGCAGAAAAGGCTCAATGCTTTTCACCCACAAAAACTTCTCCATCATTTCATGCATCTGATTGTCTGGATAATGAAGAAAGTGAAAAAGCACTGCTGAAAGCATGTGTACGATTATCTGATGATTTGGCTAATCTGATTACGGAAAGAGGGAATCAGAAGGAATCATTTTCTTTGTCTTTTCAACCTAGTGTTATTAATACACCAGTACATATGATCCACCCTACACATTCTGTTACGTGCACTAATTTTGAAAGCCCAGATACAAAAAATATCTCCTGTGCTGCTGATAGTTTTATTACAGAGACACCTGCCCAGTCAGCACCTGCGAGATTAATGCCCATTTCTGATGTTAAGCTTCAGAACATGCCTACCCAAAAGTCAACATCTTCTCAAAAGGCAGCAAAAAGAGTGCTTGACTTTTCACTCATGGAGGACAATGATGGCTTTGGCATTGGAGTAGACATGTTAGAATCTAGCAGTGCTCTGCATGAATTTGATAGCTTCCCTGAATCTAGCAGAGGATGTTGTGAGGATTGCAATGCTTTTGGGTGTTTCTGTACCTCAGGAGAAGAGACCCTTGGTTATGCTTTTGAGAAAATTATCCAAAAGCAAGCTGGTTTAGACACACAACATAAAAAATCTTCACCATTGGTGGATCTGGTTAATGTGATTCACTCTATATCTCAATCTGTCCAAAGAATTCCAATCACTAAAGAGGAGCTCCTGCATAAGATACTTATGTACAGTTTGGATTTTGTGGAGATGAGAGAAGCTGAGGAACAAATTGAGTCTCTGGAAAAGTTGGTGCCAGACTGGATCTGCAAGAAATTGATTCCTAGTGGACATAGTGTGTACTAG 1404 0.4038 MEQTACEELLKNASDFKCEKVLETVDESIVCPTPQKNAEPLTVKFREGQINLPEKKFSHAHVAQMKYILPESVCIDKVLVHDEKSLCMVPDMKITLRFEVVKDYSGESAVLALRRYFKSKLIDFFDMHPEIHISHIEEFTGQSLHVNSSTEVLSISNQTEMLPEQLQLYPTRHFSRKNNTDLAEKAQCFSPTKTSPSFHASDCLDNEESEKALLKACVRLSDDLANLITERGNQKESFSLSFQPSVINTPVHMIHPTHSVTCTNFESPDTKNISCAADSFITETPAQSAPARLMPISDVKLQNMPTQKSTSSQKAAKRVLDFSLMEDNDGFGIGVDMLESSSALHEFDSFPESSRGCCEDCNAFGCFCTSGEETLGYAFEKIIQKQAGLDTQHKKSSPLVDLVNVIHSISQSVQRIPITKEELLHKILMYSLDFVEMREAEEQIESLEKLVPDWICKKLIPSGHSVY 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0400 467 Coils Coil 437 457 - -
Aed7g0400 467 Gene3D - 388 467 IPR038090 -
Aed7g0400 467 SUPERFAMILY "Winged helix" DNA-binding domain 51 137 IPR036390 -
Aed7g0400 467 PANTHER EXPRESSED PROTEIN 52 467 - -
Aed7g0400 467 PANTHER DNA REPLICATION FACTOR CDT1 52 467 IPR045173 GO:0003677|GO:0030174|GO:0071163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0400 Aed-Chr7 2899999 2902576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0400 52 463 Core DNA Replication Machinery Family AT2G31270 27.891 2.23e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0400 K10727 - gmx:102670055 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0400 7 2899999 2902576 Aed7g0400 7 2899999 2902576 ECH