Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0369 ATGGCAAACGACGCCGTTTGCTCGCTCTTCAAAATCCCCTCAAACACCACTCTGTCAGAACAAATCAAGCATTCAACAGCTAGGGCACGCTTCTCTCTCGCGGCCTCTTCTCTCCCTCGCGCCGCCACACTAACGATGTTCGCGCTATTGGTACTCGTGTTATTGGCTTATTATTGTTTGAAGATGGCTGATGGTCATGAGACTGATAAGAACATCGAGGTGTGGAAAATCAAGAAATTGATCAAAGCCCTTGAGGCTGCTAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCGCCGCGTGATCAAATATCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCATCAAACATCAAAAGCAGGGTGAATAGGCAGTCAGTGCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTCTATAACAAGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGCACAATTGTGACTGATGATGGGAAGGAAAAGAAGGTGACTATTGACTTTGAGCCTTTCCGACCTATTAATGCTTCCCTTTATCTCTGTGACAATAAGTTTCATACTGAAGCTTTGAATGAGCTCCTGGAGTCTGATGACAAGTTTGGATTTATCGTCATGGATGGGAATGGGACCTTGTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGTTACATAAATTCAGTGTGGATCTCCCAAAGAAACATGGAAGAGGAGGGCAATCAGCTCTACGTTTTGCCCGTCTTCGCATGGAGAAGCGTCATAACTATGTGAGGAAGACAGCAGAGCATGCCACCCAGTTCTATATCAATTCTGCCACCAGCCAACCCAATGTTTCTGGGTTAATACTGGCGGGTTCAGCTGATTTTAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATAATCAATGTTGTTGATGTTTCCTACGGAGGCGAGAATGGGTTTAATCAGGCTATTGAACTATCTGCTGAAATTCTGTCGAATGTGAAGTTTATCCAGGAGAAGAAATTGATTGGAAAATACTTTGAGGAAATCAGTCAGGATACTGGAAAGTATGTTTTTGGGGTTGACGATACTCTAAAAGCTTTGGAGATGGGAGCTGTTGAGACACTTATTGTCTGGGAAAATCTGGATATGAATAGGTATGTCTTGAAAAATAGTGCTACTGGTGAGATTGTTATCAAGCACTACAACAAGGAACAGGATGCCAACCAAAGCAATTTTCGGGATCCTGAGACCTCTGCTGATTATGAGGTTCAGGAGAAGTTGTCGTTGCTGGAGTGGTTTGCAAATGAATACAAACGGTTTGGTTGCACTCTTGAGTTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGTAGAGGTTTCGGTGGGATAGGTGGGATTTTGCGTTACCAGCTTGATATGCGAACATTTGATGATTTCTCTGACGATGGAGGTGCGTTTGATTCTGAATAG 1494 0.4357 MANDAVCSLFKIPSNTTLSEQIKHSTARARFSLAASSLPRAATLTMFALLVLVLLAYYCLKMADGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAEHATQFYINSATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKIINVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEIVIKHYNKEQDANQSNFRDPETSADYEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDGGAFDSE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0369 497 Gene3D eRF1 domain 1 58 196 IPR024049 -
Aed7g0369 497 Gene3D eRF1 domain 2 197 338 IPR042226 -
Aed7g0369 497 SUPERFAMILY Translational machinery components 203 337 - -
Aed7g0369 497 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 62 495 - -
Aed7g0369 497 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 62 495 IPR004403 GO:0003747|GO:0006415
Aed7g0369 497 Pfam eRF1 domain 3 342 479 IPR005142 -
Aed7g0369 497 Pfam eRF1 domain 2 205 338 IPR005141 -
Aed7g0369 497 Gene3D - 340 496 IPR029064 -
Aed7g0369 497 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 74 478 IPR004403 GO:0003747|GO:0006415
Aed7g0369 497 Pfam eRF1 domain 1 79 199 IPR005140 -
Aed7g0369 497 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 67 201 IPR024049 -
Aed7g0369 497 SUPERFAMILY L30e-like 339 481 IPR029064 -
Aed7g0369 497 SMART eRF1_1_2 65 201 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0369 Aed-Chr7 2727246 2731668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0369 62 489 Eukaryotic Initiation Factors Gene Family AT3G26618 90.888 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0369 K03265 - gmx:100775731 814.683