Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0358 ATGGTCAGAAAGAGAAGAACCGAATTACCTGGTGGGGGTGAAAGCTCCGAGGCTCAACGCCCTGCTGAAAGGAGTGCACCACCACCCCAACAACAGGCTGCTGCTGCCCCAGCAGGGGCTGCACCCCAAGGAGGGAGAGGCTGGGGTCCCCAAGGAGGACGGGGAGGTTATGGTGGGGGCCGTGGCCGTGGGATGCCCCAACAGCAGTATGGTGCCCCTCCTGATTATCAAGGTAGGGGAAGGGGAGGGCCTTCTCAGCAAGGAGGCCGTGGAGGATATGGTGGTGGCCGAAGTGGCGGCGGTGGTGGTATGGGCAGTGGCCGTGGCGTAGGTCCTTCTTATGGTGGTCCATCCAGGCCACCGGCACCCGAGCTGCACCAAGCAACCTCAGTTCAGTCATATCAAACTGGGGTGAGTTCTCAGCCTGCACCATCTGAGGCCAGTTCTTCTCTGCCTCCAGAACCTGTTGATTTGGAACCTTCAATGGGGGAGATGGTGCTTCATTCTGAACCTACTCCAACCCCTCCTCCTGCAAGTAAATCATCAATGAGGTTTCCTCTTCGACCTGGAAAGGGTAGCTCTGGCACCAAATGCGTTGTTAAGGCTAATCATTTCTTTGCTGAGTTACCCAACAAAGATCTGCATCAATATGATGTTACAATTACTCCTGAAGTGACATCAAGGGGGGTGAACCGTGCTGTTATGGAGCAGTTGGTGAGGCTGTACCGGGAATCTCACTTGGGTAAGAGACTCCCTGCTTATGATGGACGCAAGAGTCTCTATACTGCTGGACCACTTCCTTTTATGGCAAAAGAGTTCAAAATCACTCTCGTTGATGATGATGAAGGAGCAGGAGGCCAGAGGAGGGACAGGGAGTTCAAGGTTGTGATAAAATTGGCAGCACGCGCAGACCTTCACCATTTAGGACTCTTTTTACAGGGAAGGCAAACTGATGCTCCTCAAGAGGCTTTGCAAGTCCTTGATATTGTTCTGCGTGAACTCCCTACTACAAGGTATTGTCCTGTAGGAAGATCATTTTATTCACCTGATTTGGGCAGAAGGCAGCCTTTAGGTGAGGGACTGGAAAGCTGGCGTGGTTTCTACCAGAGTATTCGTCCTACACAGATGGGACTGTCACTTAACATTGATATGTCTTCCACTGCATTTATTGAGCCATTGCCAGTAATTGACTTCGTAACTCAACTGCTGAACAGAGATGTATCTGCCCGGCCATTGTCTGATGCTGATCGTGTGAAGATCAAGAAAGCTCTCCGAGGTATCAAAGTTGAAGTAACACATCGTGGAAACATGCGAAGAAAATATCGCATCTCTGGTCTGACTTCACAGGCAACCAGGGAATTGACATTCCCTGTAGATGAAAGGGGAACCATGAAATCTGTTGTGGAGTACTTTTATGAGACATATGGGTTTGTGATTCAACATACTCAGTGGCCTTGTCTGCAAGTTGGCAATACACAGAGACCAAACTATTTGCCAATGGAGGTTTGCAAGATAGTGGAAGGTCAACGGTACTCAAAAAGGCTGAATGAGAGACAGATCACTGCTTTGCTGAAAGTCACATGCCAACGTCCTGTTGAGAGGGAGCGTGATATCATGCAGACAGTACACCATAACGCCTACCATGAAGATCCTTATGCTAAAGAATTCGGAATCAAGATTAGTGAGAAACTTGCTCAAGTTGAAGCTCGCATCCTTCCTGCTCCATGGCTCAAATATCACGATACGGGCAGAGAAAAGGATTGTCTTCCTCAAGTTGGGCAATGGAACATGATGAACAAGAAAATGGTGAATGGGGGAACAGTTAACAACTGGTTCTGCATAAACTTTTCAAGGACTGTTCAAGATAGTGTTGCCCGTGGCTTTTGCTATGAACTTGCCCAGATGTGTTATATATCTGGCATGGCATTTAATCCTGAGCCAGTAGTTCCCCCTGTCACTTCTCGCCCTGAACAAGTGGAAAAGATTCTAAAAACTCGCTATCATGATGCCAAGAACAAACTGCAAGGAAGAGAGCTTGATTTGCTCATTGTTATCTTGCCGGATAATAATGGATCTCTTTATGGTGACCTCAAACGTATATGTGAGACCGATCTAGGGCTTGTTTCACAATGCTGCTTAACTAAGCATGTCTTCAAAATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATTAATGTCAAAGTAGGAGGGAGAAACACTGTACTGGTTGATGCGCTCTCACGACGCATTCCCTTGGTTAGTGATAGGCCAACAATTATTTTTGGAGCTGATGTTACTCATCCTCATCCTGGAGAGGATTCAAGTCCATCAATTGCAGCAGTTGTGGCATCTCAAGATTATCCAGAAATTACTAAGTATGCTGGATTGGTTTGTGCCCAAGCACATAGACAGGAACTCATTCAGGATCTTTTCAAACAGTGGCAAGATCCGGTCAGAGGAACAGTGACTGGTGGAATGATCAAGTACTCTCCTTCCCTTTTCTTATATGTGAGCTGGTTAATAGAACTTCTTATATCTTTTAGGAGAGCTACAGGGCAGAAGCCACAACGCATCATATTTTACAGGGATGGTGTGAGTGAGGGACAGTTTTATCAAGTTCTATTGTTTGAGCTTGATGCTATTCGAAAGGCATGTGCATCCCTGGAACCCAACTATCAGCCTCCAGTGACTTTTGTGGTCGTTCAAAAGCGTCACCACACAAGGCTCTTTGCCAGCAACCATCAAGACAAGAGTTCTGTTGATAGGAGTGGCAACATATTGCCTGGGACTGTTGTAGACTCCAAAATCTGCCATCCAACTGAATTTGACTTTTATCTCTGCAGCCATGCTGGAATACAGGGTACAAGCCGTCCTGCTCACTACCATGTATTGTGGGATGAAAACAATTTTACTGCTGATGCCTTGCAAACACTCACCAACAATCTTTGCTACACATATGCTCGGTGCACCCGATCTGTCTCAATTGTGCCTCCTGCATACTATGCTCACTTGGCGGCATTCCGAGCAAGGTTTTACATGGAACCAGAGACTTCTGACAGTGGTTCAATGACAAGTGGAGCTGTTGCAGGCCGTGGAATGGGCGGTGTAGGACGCAGTACCCGTGCACCTGGTGCTAATGCTGCTGTGAGACCATTACCTGCACTCAAGGAGAACGTCAAGAGAGTTATGTTTTATTGTTAA 3204 0.4719 MVRKRRTELPGGGESSEAQRPAERSAPPPQQQAAAAPAGAAPQGGRGWGPQGGRGGYGGGRGRGMPQQQYGAPPDYQGRGRGGPSQQGGRGGYGGGRSGGGGGMGSGRGVGPSYGGPSRPPAPELHQATSVQSYQTGVSSQPAPSEASSSLPPEPVDLEPSMGEMVLHSEPTPTPPPASKSSMRFPLRPGKGSSGTKCVVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFMAKEFKITLVDDDEGAGGQRRDREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSARPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCINFSRTVQDSVARGFCYELAQMCYISGMAFNPEPVVPPVTSRPEQVEKILKTRYHDAKNKLQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDYPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMIKYSPSLFLYVSWLIELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHQDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVAGRGMGGVGRSTRAPGANAAVRPLPALKENVKRVMFYC 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0358 1067 CDD Piwi_ago-like 551 1014 IPR045246 -
Aed7g0358 1067 SUPERFAMILY PAZ domain 199 544 IPR036085 GO:0005515
Aed7g0358 1067 Gene3D paz domain 386 511 - -
Aed7g0358 1067 Gene3D - 571 744 - -
Aed7g0358 1067 ProSiteProfiles PAZ domain profile. 393 507 IPR003100 GO:0005515
Aed7g0358 1067 Pfam N-terminal domain of argonaute 196 331 IPR032474 -
Aed7g0358 1067 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 89 1066 - -
Aed7g0358 1067 MobiDBLite consensus disorder prediction 125 147 - -
Aed7g0358 1067 Pfam Glycine-rich region of argonaut 71 161 IPR024357 -
Aed7g0358 1067 Pfam Argonaute linker 2 domain 533 579 IPR032472 -
Aed7g0358 1067 Pfam Mid domain of argonaute 590 665 IPR032473 -
Aed7g0358 1067 PANTHER PROTEIN ARGONAUTE 1A 89 1066 - -
Aed7g0358 1067 Pfam PAZ domain 397 522 IPR003100 GO:0005515
Aed7g0358 1067 Pfam Argonaute linker 1 domain 341 391 IPR014811 -
Aed7g0358 1067 CDD PAZ_argonaute_like 392 506 - -
Aed7g0358 1067 Gene3D - 750 1067 IPR036397 GO:0003676
Aed7g0358 1067 SUPERFAMILY Ribonuclease H-like 667 1015 IPR012337 -
Aed7g0358 1067 SMART PAZ_2_a_3 397 529 IPR003100 GO:0005515
Aed7g0358 1067 Pfam Piwi domain 682 1014 IPR003165 GO:0003676
Aed7g0358 1067 ProSiteProfiles Piwi domain profile. 681 1015 IPR003165 GO:0003676
Aed7g0358 1067 SMART Piwi_a_2 681 1015 IPR003165 GO:0003676
Aed7g0358 1067 MobiDBLite consensus disorder prediction 1 194 - -
Aed7g0358 1067 SMART DUF1785_2 340 392 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0358 Aed-Chr7 2662166 2669585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0358 75 1067 Eukaryotic Initiation Factors Gene Family AT1G48410 80.380 0.0 1618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0358 K11593 - gmx:100778754 1858.57