Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0355 ATGGCGAACAACGTTGTTGCTGCTGTTCTTAAGGTAGCTCCATTACCCATAACAAACAGTGCTCTCACTTTCAGCCAAAAAAACATCAAGAGCCAAACACACACACTTCATCTGAATTGCTCCCAAACCATAAAAAACAGAACAACAATCTCAATCCTCAGAAACAAAGCATGTTGGTCTGTGTTGGCGTGTCTCCCTCCTGCTTCTTCTGAATCCTCAACCTCATCTTCCACTGCTAAACCCTCTTTTCCTGCTGCTCCAACTAAGCTTTATGTCAGCGGGCTATCATTTCGTACCACTGAAGAGAGTTTGAGAAATGCATTTAAAATTTTTGGTCAACTCATGGAAGTCAAGCTGGTGATGGATAGAATTGCAAATAGACCAAGAGGGTTTGCTTTTCTTCGTTATGCAACTGAAGAAGAATCTCAGAAGGCTATTGAGGGAATGCATGGAAAGTTCTTGGATGGTAGGGTCATATTTGTAGAAGTTGCCAAACCGAGATCAGAGCTACCACAAAGGCACAAGGAAGACACTAGATTGTGA 543 0.4236 MANNVVAAVLKVAPLPITNSALTFSQKNIKSQTHTLHLNCSQTIKNRTTISILRNKACWSVLACLPPASSESSTSSSTAKPSFPAAPTKLYVSGLSFRTTEESLRNAFKIFGQLMEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSELPQRHKEDTRL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0355 180 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90 159 IPR000504 GO:0003723
Aed7g0355 180 Gene3D - 66 179 IPR012677 -
Aed7g0355 180 SMART rrm1_1 89 162 IPR000504 GO:0003723
Aed7g0355 180 PANTHER ORGANELLE RRM DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 12 177 - -
Aed7g0355 180 PANTHER NUCLEOLAR PROTEIN 8 12 177 - -
Aed7g0355 180 SUPERFAMILY RNA-binding domain, RBD 81 173 IPR035979 GO:0003676
Aed7g0355 180 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 88 166 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0355 Aed-Chr7 2634312 2637108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0355 82 173 Eukaryotic Initiation Factors Gene Family AT3G16380 34.375 7.18e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0355 - - gmx:100305561 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0355 7 2634312 2637108 Aed7g0355 7 2634312 2637108 ECH