Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0353 ATGGAGTATGGAAGTGGGTCTCCCGGTGATCACCATCATCACCATGATGGTTCTTCTGATTCCCAGAGAAGGAAGAAGCGTTACCACCGTCACACAGCTAATCAGATTCAGAGGCTTGAATCGATGTTCAAGGAGTGTCCGCACCCAGATGAGAAGCAGAGGTTGCAGTTGAGTAGGGAGTTAGGCTTGGCGCCTAGACAGATCAAATTTTGGTTCCAGAACAGGAGGACCCAGATGAAGGCCCAGCATGAGAGAGCTGATAATTGTGCACTCCGGGCAGAGAATGACAAGATTCGTTGTGAGAACATAGCCATAAGGGAGGCCTTGAAAAATGTCATCTGCCCCTCTTGTGGTGGTCCTCCTATGAATGATGATTGCTACTTTGATGAACAGAAGTTGAGATTGGAGAATGCTCAGCTCAAAGAGGAGCTTGATAGAGTATCTAGCGTTGCAGCCAAGTACATTGGAAGGCCAATTTCTCAGCTCCCACCAGTTCAGCCAATACATATATCTTCCCTGGATTTGTCAATGGGGACTTTTGCAAGCCAAGGGATGGGTGGCCCTTCCCTTGATCTTGATCTTCTCCCAGGGAGTTCTTCTCAAACTATGCCGAATCTGCCTCCGTTCCAACCGGCTTGTCTTTCGGACATGGATAAGTCCCTCATGTCAGACCTTGCCTCAAATGCCATGGAGGAAATGATCAGGCTGTTGCAAACAAATGAGCCCTTGTGGATGAAAGGTGCTGATGGGAGGGATGTCCTTGATCTTGATAGCTATGATAGAATGTTCCCCAAGCCTAATAGTCACTTGAAGAACCCCAATGTTCATGTTGAAGCTTCTAGAGATTCTGGAGTTGTAATTATGAATGGCTTAACTTTGGTTGACATGTTTATGGACCCGAACAAGTGGATGGAGCTATTTCCCACCATTGTCACAATGGCTAGAATAATTGAGGTTTTATCTTCTGGAATGATGGGGGGTGGTCATAGTGGTTCTTTGCAATTGATGTATGAAGAGTTGCAAGTGCTTTCTCCACTTGTTTCTACTAGAGAATTCTACTTCCTGCGTTACTGTCAGCAAATTGAGCAAAGCTTATGGGCAATAGTAGATGTTTCATATGATTTCCCTCAAGATAACCAATTTGCTCCTCAATTTCGATCTCATCGCCTTCCTTCTGGTGTCTTTATCCAAGACATGCCTAATGGATATTCCAAGGTTACTTGGATTGAACATGTAGAGATTGAAGACAAGACTCCAGTTCATAAGCTCTACAGAAACCTTATTTATAGTGGCATTGCTTTTGGAGCACAAAGATGGCTAACCACACTTCAGAGGATGTGTGAAAGGATTGCTTGTCTGATGGTGACAGGAAACTCTACCCGCGATCTTGAAGGAGTGATTCCCTCACCTGTAGGCAAGAGGAGCATGATGAAACTTGCACAAAGGATGGTCACCAATTTTTGTTCAAGCATTAGTGCATCAGCTGGACATAGATGGACCACACTCTCTGGGAGTGGGATTAATGAGATTGGAGTCAGAGTCACTGTGCACAAGAGCTCAGACCCTGGCCAGCCTAATGGTGTGGTGCTTAGTGCAGCCACCACCATTTGGCTCCCCATCCCACCACAAACTGTGTTCAATTTCTTCAAGGATGAAAAGAAAAGGCCTCAGTGGGATGTTCTTTCCAATGGCAATGCTGTGGAAGAGGTTGCTCATATAGCAAATGGTCCACACCCTGGTAACTGCATATCTGTGCTTCGTGCATACAACTCAAGTCAAAACAACATGCTGATCCTCCAGGAGAGCTGTGTGGACTCATCAGGTGGTTCCATAGTGGTGTACTGTCCAGTGGATCTGCCAGCCATAAACATAGCAATGAGTGGTGAGGACCCTTCCTACATCCCTCTCCTCCCATCAGGATTCACCATTTCCCCTGATGGCCAACCAGACCAAGATAGTGTTGGAGGAGCCTCAAGCAGCACAAGCGCAAGCCGAGGTGGCAGTTCTGGTTCAGGTTCAGGTTCTGGTGGCTCACTCATCACTGTTGCATTCCAAATCCTAGTGAGTAGCTTGCCATCGGCCAAACTCAACATGGAGTCGGTGAACACTGTTAATAGTCTCATCGGCAACACTGTCCAACACATTAAGGCTGCTTTGAATTGTCCTAGTTCCTGA 2175 0.4644 MEYGSGSPGDHHHHHDGSSDSQRRKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPMNDDCYFDEQKLRLENAQLKEELDRVSSVAAKYIGRPISQLPPVQPIHISSLDLSMGTFASQGMGGPSLDLDLLPGSSSQTMPNLPPFQPACLSDMDKSLMSDLASNAMEEMIRLLQTNEPLWMKGADGRDVLDLDSYDRMFPKPNSHLKNPNVHVEASRDSGVVIMNGLTLVDMFMDPNKWMELFPTIVTMARIIEVLSSGMMGGGHSGSLQLMYEELQVLSPLVSTREFYFLRYCQQIEQSLWAIVDVSYDFPQDNQFAPQFRSHRLPSGVFIQDMPNGYSKVTWIEHVEIEDKTPVHKLYRNLIYSGIAFGAQRWLTTLQRMCERIACLMVTGNSTRDLEGVIPSPVGKRSMMKLAQRMVTNFCSSISASAGHRWTTLSGSGINEIGVRVTVHKSSDPGQPNGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQWDVLSNGNAVEEVAHIANGPHPGNCISVLRAYNSSQNNMLILQESCVDSSGGSIVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGQPDQDSVGGASSSTSASRGGSSGSGSGSGGSLITVAFQILVSSLPSAKLNMESVNTVNSLIGNTVQHIKAALNCPSS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0353 724 CDD START_ArGLABRA2_like 219 448 - -
Aed7g0353 724 ProSiteProfiles START domain profile. 215 452 IPR002913 GO:0008289
Aed7g0353 724 SUPERFAMILY Homeodomain-like 5 82 IPR009057 -
Aed7g0353 724 SUPERFAMILY Bet v1-like 216 450 - -
Aed7g0353 724 CDD homeodomain 24 83 IPR001356 GO:0003677
Aed7g0353 724 Coils Coil 130 150 - -
Aed7g0353 724 SMART START_1 224 449 IPR002913 GO:0008289
Aed7g0353 724 SMART HOX_1 23 86 IPR001356 GO:0003677
Aed7g0353 724 MobiDBLite consensus disorder prediction 644 675 - -
Aed7g0353 724 SUPERFAMILY Bet v1-like 470 716 - -
Aed7g0353 724 MobiDBLite consensus disorder prediction 1 23 - -
Aed7g0353 724 Gene3D - 10 96 - -
Aed7g0353 724 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 16 722 - -
Aed7g0353 724 Pfam START domain 226 449 IPR002913 GO:0008289
Aed7g0353 724 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Aed7g0353 724 ProSitePatterns 'Homeobox' domain signature. 57 80 IPR017970 GO:0000981|GO:0006355
Aed7g0353 724 MobiDBLite consensus disorder prediction 1 32 - -
Aed7g0353 724 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 722 IPR042160 -
Aed7g0353 724 Pfam Homeodomain 25 80 IPR001356 GO:0003677
Aed7g0353 724 MobiDBLite consensus disorder prediction 639 675 - -
Aed7g0353 724 Gene3D - 226 449 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0353 Aed-Chr7 2613086 2617106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0353 20 724 Homeobox Transcription Factor Family AT1G73360 65.070 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed7g0353 START 4.8e-46 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0353 K09338 - gmx:100809075 1319.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0353 7 2613086 2617106 Aed7g0353 7 2613086 2617106 ECH