Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0350 ATGGCTAGTTTTGAAAATGATGGGGAGCCAGGGCCATCAGAAACACATGCACAACATGAAGAACTTGAGAATTCTAGATTTGGGAAGAAGGTGGTATCAAGGACAAAAAGTGGATCAATTTCTATTCCTATGGTCTCCATGGAGCCTTATGAGAGAGAAACTAGTCTTTTGGGACATACTGGTCCACTTATGCATGTGAAAGGTTCACTATATGCTACCAATGGAACTGAAAATCTTTTGCATCAGAGTGTAGTTGTGAAAGGAAACAAAGTAGTAGAGAATAAAACAGAAAAAAATTCTACTCTTGACAGAAAAGATGAAAATCATTGGAATAATAACAACTATGATAGAAAGAATGAACACTTGCTGAGGTCAGGGCTACTGGGAATGTGTAATGATCCTTATTGTACTACTTGTCCTACTTACTTCAGAGCCTCTCTGCAAAGACTTTCAAAAGGTTCCAATGTCTTTGATCCCCAGTTTCACTTCCACAGTGCTTTTTATGGGGATGCCAACGGTTTGGGGAGAAAAATTATGTCTTTCTTCTCTTCATATGTCCCTGGAGTTATAAATCCTCACTCAAAAGTTGTACAACAATGGAACAAATTTTTGGCCATTTTTTGCATGGTGGCAATTTTCGTGGATCCATTGTTTTTCTTCTTAATCTATGTGCAGAAGGGTGGTAAATGTATATCTATCGACTGGGACATGACAAAAGTACTTGTTGTAGTAAGAAGCATGAATGATGTTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGCTGGCCTATGTTTCTCCCGAGTCAAGGGTTGTTGGTGCAGGAGATTTAGTTGATCATCCCAAGAAAATTGCTCTTCATTACCTCAAGGGTTATTTTCTTTTTGACTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTTTTGGTCATACCAAAACATTTGGGGACATCAGGAGCAAACTATGCTAAGAATCTTCTGCGTGCAGTGATCCTTGTGCAGTATATTCCCAAATTATTCAGGATTCTGCCTCTGCTAATTGGACAATCTCCAACAGGATTTATATTTGAGTCAGCTTGGACAAATTTCATTATAAATCTTCTCATTTACATTCTTGCTAGCCATGTTGTTGGATCTTGTTGGTACCTCTTTGGTCTACAGAGAGTTAATCGATGCTTGCGAGATGCCTGCGGTAACTCTGATATTGATGGATGCATGGAAGACATTGATTGTGGAAGACATAGTCATATCAGAAACAACTATTCTGAACAAACATTATTATCTCTGTGGAGCAACAATTCAGATGCCATTGCCTGTTTGAATCCCTCCTCCTCTAGTGGTTTCCGTTATGGCATCTATGTCAATGCTCAAATCAGTACTCTAGCTGGTAGTTTAATCCCGAGCACTTTTTGGGGGGAAGTCCTGTTTACTATGGCCATCATAGGATTGGGACTCTTGCTTTTTGGAGTTCTCATTGGAAACATACATAACTTTCTTCAAGGTCTTGGACGGAGAAGGCTAGAAATGCAACTCAGAGGCCGTGATGTTGAGCAATGGATGAACCATCGTGGCTTGCCAGAAGATATAAGAAGGAAAGTACGACAGGCTGAACGGTACAATTGGGCTGCAACAAAGGGAGTGAATGAAGTAATGCTTATGCAGAATTTGCCAGATGATCTTCAGAGAGAGATAAGACGTTATCTCTTCAAATTTGTTAAGAAAGTCCGAATCTTCACCCTGATGGATGAGCCTTTCTTAGATGCCATTTGTGAGAGACTGAGACAGAAGACATACATCAAAGGAAGTATAATTTTGAGTCATGGTTGTCTGGTAGAGAATATGATCTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAAATGGAATTGGAGTTCCCTTATCTGAAGGAGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCTGTAAGCAAAGATGGTAAAAAAGTAAAGCTTCCAAGACAGAGGTGGCTTAGCAATAGGAGAGTGAAGTGCTTAACAAATGTGGAGGCTTTTTCAATCCGAGCTGAAGATCTTGTAGAAGTCACCACCCGATTCATGAGATTCTTGCGGAATCTTCGTGTTCAAGGATCCTTAAGGTATGAATCACCTTACTGGAGATCCTTGGCAGCAATTCGAATTCAGGCTGCATGGAGATACAAGAAGAAACGTAAAAGTCGTGTTGATACCTCAAAATTAGATCAAACATTGAATTCATGGGTTGTATAA 2265 0.3951 MASFENDGEPGPSETHAQHEELENSRFGKKVVSRTKSGSISIPMVSMEPYERETSLLGHTGPLMHVKGSLYATNGTENLLHQSVVVKGNKVVENKTEKNSTLDRKDENHWNNNNYDRKNEHLLRSGLLGMCNDPYCTTCPTYFRASLQRLSKGSNVFDPQFHFHSAFYGDANGLGRKIMSFFSSYVPGVINPHSKVVQQWNKFLAIFCMVAIFVDPLFFFLIYVQKGGKCISIDWDMTKVLVVVRSMNDVVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIALHYLKGYFLFDLFVVFPLPQIMIFLVIPKHLGTSGANYAKNLLRAVILVQYIPKLFRILPLLIGQSPTGFIFESAWTNFIINLLIYILASHVVGSCWYLFGLQRVNRCLRDACGNSDIDGCMEDIDCGRHSHIRNNYSEQTLLSLWSNNSDAIACLNPSSSSGFRYGIYVNAQISTLAGSLIPSTFWGEVLFTMAIIGLGLLLFGVLIGNIHNFLQGLGRRRLEMQLRGRDVEQWMNHRGLPEDIRRKVRQAERYNWAATKGVNEVMLMQNLPDDLQREIRRYLFKFVKKVRIFTLMDEPFLDAICERLRQKTYIKGSIILSHGCLVENMIFIVRGKLESIGENGIGVPLSEGDACGEELLTWYLEHSSVSKDGKKVKLPRQRWLSNRRVKCLTNVEAFSIRAEDLVEVTTRFMRFLRNLRVQGSLRYESPYWRSLAAIRIQAAWRYKKKRKSRVDTSKLDQTLNSWVV 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0350 754 SUPERFAMILY Voltage-gated potassium channels 192 506 - -
Aed7g0350 754 Pfam Ion transport protein 202 503 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed7g0350 754 Gene3D Jelly Rolls 576 700 IPR014710 -
Aed7g0350 754 SUPERFAMILY cAMP-binding domain-like 506 705 IPR018490 -
Aed7g0350 754 CDD CAP_ED 578 704 IPR000595 -
Aed7g0350 754 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 458 744 - -
Aed7g0350 754 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 5 457 - -
Aed7g0350 754 SMART cnmp_10 578 710 IPR000595 -
Aed7g0350 754 MobiDBLite consensus disorder prediction 1 31 - -
Aed7g0350 754 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 458 744 - -
Aed7g0350 754 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 457 - -
Aed7g0350 754 MobiDBLite consensus disorder prediction 12 30 - -
Aed7g0350 754 Gene3D Helix hairpin bin 505 569 - -
Aed7g0350 754 Gene3D - 200 502 - -
Aed7g0350 754 ProSiteProfiles cAMP/cGMP binding motif profile. 578 646 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0350 Aed-Chr7 2576707 2581345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0350 28 656 Ion Channels AT3G17700 56.712 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0350 K05391 - gmx:112997782 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0350 7 2576707 2581345 Aed7g0350 7 2576707 2581345 ECH