Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0349 ATGGCTCATTTTGAAAAAGATGAGGTGCCAATGCTGTCAGAAACACATGCTCAACTATCTGATGAAGTCGTGGATTCTAATTTCCGGAGGCTTGTATCTAGGACACGAAGTGCTTCAATTTCTATTCCTATGGCCTCCTTGGAATCATATGAGAAAGAAACTAGTCTTGTGGGACATACTGGTCCACTTCGTACTGTGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCCCTGTATGCTACCAATGGAACTGGAAATCTTTCACGAGTTGCAACTGGAGCCAAAGTAGTGGAGAACAAGACAGAAAATCATTGGGATAACGACAATGATAGAACGAATGAGCACTTAATGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCCACTTATTTCAAGGCTTATCAACCAAGAACTCGGAGAACTTCAGCTATATTTGATCCCAAGTTCCACAATAATCTATATGGGGATGCCAAGGGTTTTGGAAGAAAACTTTTTTCCTTCTGCTCTTCGTATGTTCCTGGAGTTATGAATCCACATGCAAAAATTGTACAACAATGGAACAAGATTTTGGCCATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAAGAAGGATGATATATGTATTGCTATCAATTGGCCAATGACAACAACACTTGTTTTCTTTAGAAGCATTAATGATTTCATATATTTCTTTAACATTCTTCTCCAGGTCAAAAGGAAAACAAAAGTGCATTTTAGGTTGGCTTATGTTTCTCCTGAATCAAGGGTAGTAGGTGCTGGAGATTTAGTTGACCATCCCAAGAAAATTGCTCTTAATTATCTGAAGGGTTATTTTTTCATTGACCTATTTGTTGTATTGCCTCTTCCTCAGATAATGATATTATCTGTCCTACCAAAGTACTTGGGAGTATCAGGAGCAAATTATGCTAAAAATCTTCTGCGTGCAGCGATCCTTGTGCAGTATTTTCCCAGATTATTCAGGTTCCTGCCTCTGTTAATTGGCCAGTCTCCAACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGTCATGTTGTTGGTTCTGGTTGGTACCTCTTTGGTCTACAGAGGGTCAATCAATGCTTGCGCTATGCCTGCCGTGATTCTAATATTACTGGATGCTCGGCATTTATGGATTGTGGCAGTGGCCGTTCACATTCACATAACCAGTCTCTGTGGAACGAAAATGTAAATGCCACTGCTTGTTTGAATGCCAGTTCCGGTGCTTTTCCATATGGGATCTATGTAAATGCTGTACCACTTACTATAGAAACTAGGGTGGTCAACAAATATATATTTGCACTGTTTTGGGGCTTCCAGCAAATCAGTACTCTGGCTGGTAATCAAACCCCGAGCTATTTTGTGTGGGAAGTACTTTTTACAATGGCCATCATAGGACTAGGACTCTTGCTTTTTGCACTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGCAGGAGGCTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCCGAAGATCTAAGAAGGAGAGTACGTCAGGCTGAACGGTATAGCTGGGCAGCAACAAGGGGAGTGAATGAAGAAATACTTATGGAGAATTTGCCAGAAGATCTCCAGACTGACATAAGACGTCATCTTTTCAAATTTGTTAAGAAAATGTTAGGTGAACTCCGAAATCTATTCTCAGCCATGGTTCGAATCTTTGCCTTGATGGATGAGCCTATCTTAGATGCCATTTGTGAGAGACTAAAACAGAAGACATACATAAAAGGGAGTAAAGTTTTGAGTCAGGGTGGTCTTGTAGAAAAGATGGTCTTTGTTGTACGTGGGAAATTGGAGAGCTTTGGAGATGACGGAACTATGGTTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGAATTCTACTGTAACCACAGATGGTAAAAAAGTAAGGGTTCAAGGGCAGAGGTTTCTAAGCAACAGGACTGTAAGATGCTTAACAAATGTGGAGGCATTTTCGCTTCGCGCTGCAGACCTTGAGGAACTCACAATTCTTTTCACAAGATTCTTGCGGAACCCTCATGTTCAAGGAGCACTAAGGTATGTATCACCTTATTGGAGATCCCTTGCAGCAAACCGTATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGTGCTAATACCTCTCAATCATATCAAAATTGA 2328 0.4081 MAHFEKDEVPMLSETHAQLSDEVVDSNFRRLVSRTRSASISIPMASLESYEKETSLVGHTGPLRTVRKTPFVQMSGPLYATNGTGNLSRVATGAKVVENKTENHWDNDNDRTNEHLMRSGQLGMCNDPYCTTCPTYFKAYQPRTRRTSAIFDPKFHNNLYGDAKGFGRKLFSFCSSYVPGVMNPHAKIVQQWNKILAIFCLVAIFVDPLFFFLIYVKKDDICIAINWPMTTTLVFFRSINDFIYFFNILLQVKRKTKVHFRLAYVSPESRVVGAGDLVDHPKKIALNYLKGYFFIDLFVVLPLPQIMILSVLPKYLGVSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSGWYLFGLQRVNQCLRYACRDSNITGCSAFMDCGSGRSHSHNQSLWNENVNATACLNASSGAFPYGIYVNAVPLTIETRVVNKYIFALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYSWAATRGVNEEILMENLPEDLQTDIRRHLFKFVKKMLGELRNLFSAMVRIFALMDEPILDAICERLKQKTYIKGSKVLSQGGLVEKMVFVVRGKLESFGDDGTMVPLSEGDACGEELLTWYLENSTVTTDGKKVRVQGQRFLSNRTVRCLTNVEAFSLRAADLEELTILFTRFLRNPHVQGALRYVSPYWRSLAANRIQVAWRYRKKRLSRANTSQSYQN 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0349 775 Gene3D Jelly Rolls 603 727 IPR014710 -
Aed7g0349 775 Gene3D Helix hairpin bin 520 585 - -
Aed7g0349 775 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 770 - -
Aed7g0349 775 SUPERFAMILY Voltage-gated potassium channels 185 521 - -
Aed7g0349 775 CDD CAP_ED 605 721 IPR000595 -
Aed7g0349 775 Gene3D - 193 518 - -
Aed7g0349 775 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 770 - -
Aed7g0349 775 SUPERFAMILY cAMP-binding domain-like 521 725 IPR018490 -
Aed7g0349 775 SMART cnmp_10 605 723 IPR000595 -
Aed7g0349 775 Pfam Ion transport protein 194 521 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed7g0349 775 ProSiteProfiles cAMP/cGMP binding motif profile. 605 673 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0349 Aed-Chr7 2549017 2558823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0349 2 682 Ion Channels AT3G17700 59.770 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0349 K05391 - gmx:100794895 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0349 7 2549017 2558823 Aed7g0349 7 2549017 2558823 ECH