Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0348 ATGGCTAATTTTGGAAATGACAAGCTGCCGATGCTGTCAGATACATATGCACACCCATTTGATGAACCCTTGGACTCTAAATTACGAAGGACAATAACTAGGACACAAAGCGCATTAATGTCTATGCCTATAAGCTCCTTGGAGTCATATGAGAAAGAAACTAGTCTCGCGGGACATACTGGTCCACTCGTGAGCAAGAGAAAAACATCCTTTATGCAGATGAGTGGTCCATTAAATGCTACCACCGGAACTGGAAATCTTCTGCAGCAGCATACTGTCTCTGAAAAAAAACCTGAGAGAGAAAAAGATGATATTCCTAAAGACAATGATAGAAAAAATGAACACTTACTAAGGTCTGGGCAACTGGGAATGTGCAATGATCCTTATTGTACTACTTGTCCTACTTACTTCAATGCTTCTCAGCAAAAAAATCCAAAACCTTCTACTCCATGGAATCCAAAGGATAATAAATGTATTGTTATCAACTGGCCTTTGACAACCACACTTGTTTTATTTAGATGCATGAATGATTTTGTTTATTTCCTCAACATTCTTCTCCAGTTTAGGTTAGCTTATGTTTCTCGTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTTCATTACCTAAAGGGTTATTTCCTTTTTGACTCATTTGTTGTATTTCCTCTTCCTCAGATAATGATATTATTTGTCCTACCAAATTCCTTGGAGGGAGCAAATTATGCTAAAAATCTTCTGCGTGCAGCAATCTTAGTGCAATATATCCCCAAGTTATTCAGGTTTATGCCACTGCTAATTGGGCAATCTCCGATTGGATTCATATTTGAGTCAGCCTGGGCAAATTTTGTTATAAATCTTCTCATTTTTATGCTTGCTAGTCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTTCAGAGGGTTAATCAGTGTTTACGAAATGCCTGCCATAGTTCTAAAATACCTGGATGCATGAAGTTCATTGATTGTGGACGTGGCCATGGAAACAATCAGCCTGGCTTAGCATCAGATAAGTGGATCAACAATTCCGATGCTGTTGCTTGTTTGTATCCCTCTCCTGATGGTTTCTCCTACGGGATTTATGAGAATGCTGTACCACTTACTATAGAAACTAGCACGGTCAACAAATATGTTTATTCTCTTTTTTGGGGATTCCAGCAAATCAGCACTCTAGCTGGTAATCTAGAGCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGGCCATCATAGGCATGGGACTCTTGCTTTTTGCTATTCTTATTGGAAACATACAGAACTTTCTACAGGCTCTTGGTCGGAGGAAGATGGAAATGCAACTTAGATGCCGTGATGTCGAGCAATGGATGAGCCATCGGCGCTTACCAGAAGACCTAAGAAGGAGAGTAAGAGAGGCTGAACGGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAAACGCATATGGAGAATTTGCCAGAAGATCTCCAGAGAGACATAAGACGTCATCTCTTCAAATTTGTGAAGAAAATTCGGCTTTTTGCTCTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGACTAAAACAAAAGACATACATCAAAGGATGTAGAATTCTGAGTCAGGGTGGTCTGGTCGGGAAGATGGTATTCGTGGTGCGTGGCAAATTGGAAAGCATTGGAGATGACGGAACTAGAATTCCTCTATCTGAAGGTGATTCTTGTGGTGAAGAACTTCTGAGATGGTATCTTGAACATTCTTCAGTCAGCATAGATGGTAGAAAAGTAAGGCTTCCAGGAAAGAGTTTGGTTAGCAACAGAACAGTAAGGTGCTTAACAAACGTGGAGTCCTTTTCACTCTCTGCTTCAGACCTTGAAGAAGTCACAATCCTTTTCACGAGATTCTTGCGGAGTCCATGCGTTCAAGGAGCTCTAAGGTACGAGTCACCTTATTGGAGATCCCTTGCTGCTACTCGCATTCAAGTTGCATGGAGATACTGGAAGAAATGTCTAAGTCGTATTAATTCCTCCCTCACACCATTAAATTAA 2079 0.4084 MANFGNDKLPMLSDTYAHPFDEPLDSKLRRTITRTQSALMSMPISSLESYEKETSLAGHTGPLVSKRKTSFMQMSGPLNATTGTGNLLQQHTVSEKKPEREKDDIPKDNDRKNEHLLRSGQLGMCNDPYCTTCPTYFNASQQKNPKPSTPWNPKDNKCIVINWPLTTTLVLFRCMNDFVYFLNILLQFRLAYVSRESRVVGAGDLVDHPKKIALHYLKGYFLFDSFVVFPLPQIMILFVLPNSLEGANYAKNLLRAAILVQYIPKLFRFMPLLIGQSPIGFIFESAWANFVINLLIFMLASHVVGSCWYLFGLQRVNQCLRNACHSSKIPGCMKFIDCGRGHGNNQPGLASDKWINNSDAVACLYPSPDGFSYGIYENAVPLTIETSTVNKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKMEMQLRCRDVEQWMSHRRLPEDLRRRVREAERYNWAATRGVNEETHMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICERLKQKTYIKGCRILSQGGLVGKMVFVVRGKLESIGDDGTRIPLSEGDSCGEELLRWYLEHSSVSIDGRKVRLPGKSLVSNRTVRCLTNVESFSLSASDLEEVTILFTRFLRSPCVQGALRYESPYWRSLAATRIQVAWRYWKKCLSRINSSLTPLN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0348 692 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 102 - -
Aed7g0348 692 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 154 687 - -
Aed7g0348 692 SUPERFAMILY cAMP-binding domain-like 449 641 IPR018490 -
Aed7g0348 692 SUPERFAMILY Voltage-gated potassium channels 161 450 - -
Aed7g0348 692 Gene3D Jelly Rolls 520 644 IPR014710 -
Aed7g0348 692 MobiDBLite consensus disorder prediction 74 92 - -
Aed7g0348 692 CDD CAP_ED 522 638 IPR000595 -
Aed7g0348 692 Gene3D - 157 447 - -
Aed7g0348 692 SMART cnmp_10 522 657 IPR000595 -
Aed7g0348 692 MobiDBLite consensus disorder prediction 93 113 - -
Aed7g0348 692 MobiDBLite consensus disorder prediction 74 113 - -
Aed7g0348 692 ProSiteProfiles cAMP/cGMP binding motif profile. 522 590 IPR000595 -
Aed7g0348 692 Gene3D Helix hairpin bin 449 514 - -
Aed7g0348 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 102 - -
Aed7g0348 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 154 687 - -
Aed7g0348 692 Pfam Ion transport protein 167 450 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0348 Aed-Chr7 2529734 2547729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0348 154 600 Ion Channels AT3G17700 68.374 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0348 K05391 - gmx:100795427 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0348 7 2529734 2547729 Aed7g0348 7 2529734 2547729 ECH