Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0344 ATGGTTATTACATCTACTGCCACACACCCAGATGTACAAGATGAACGCCTATCCTCTACTTTTGGTTCCAGATATGTGCGTGAACCTATTCCCAAGTTCAAGCTGCCAGAGAAATCCATACCAAAGGATGCAGCTTATCAGTTAATAAACGATGAGTTGATGCTGGATGGTGCACCAAGGCTCAACTTGGCTTCATTTGTGACCACTTGGATGGAGCCTGAGTGTGACAAACTCATAATGGCTTCACTTAACAAAAACTATGTTGACATGGATGAGTACCCTGTCACTACTGAGCTCCAGAACCGGTGTGTTAATATAATAGCAAATCTATTCCATGCTCCTATAAGTGAAGATGAGACTGCGGTAGGTACGGGAACTGTGGGATCATCAGAGGCAATAATGTTAGCAGGTCTGGCTTTTAAAAGGAAATGGCAGACAAAGAGAAAAGCAGAAGGAAAACCATATGATAAGCCCAACATAGTTACTGGGGCTAATGTGCAGGTTTGCTGGGAAAAATTTGCAAGGTACTTTGAGGTAGAGCTCAAGGAAGTGAAACTCAGAGAGGGATACTATGTGATGGACCCTGCGAAAGCAGTTGAAATGGTAGATGAAAACACCATCTGTGTTGCAGCCATTTTGGGGTCAACTATGACCGGAGAGTTTGAGGATGTGAAGCTTCTGAATGAACTTCTTACTGAAAAGAACAAGGAGACAGGTTGGGATACTCCAATTCATGTAGATGCTGCCAGTGGTGGGTTTATTGCCCCATTTCTATATCCTGATTTAGAGTGGGATTTCCGTTTGCCATTGGTGAGAAGCATCAATGTTAGCGGTCATAAGTATGGTCTTGTCTATCCTGGTGTTGGTTGGGTTGTCTGGAGGAGCAAAGATGACTTGCCAGATGAACTTGGTTACAAAGATATCATGGCAAATTGCTGGGCGAATGCAAGAGTTCTGAAGGAAGGAATTGAGAGAATAGGGCGGTTCAACATCATCTCCAAGGACATCGGCGTGCCACTTGTAGCCTTCACCTTGAAAGACAGCAGCCAACACAAAGTGTTTGAAATAGCAGACCAGCTGAGAAAATATGGGTGGATAGTTCCGGCCTATACAATGCCACCAGACGCGCAACACATTGAGGTCCTTCGGGTGGTGATCAGGGAGGATTTGAACCGCAACTTGGCTGAGAGACTTGCTTCTGACATAGAGAAAGTTGTGCTGCTATTGGACACTCTTCCTAGCCCCATCACTACCAAGGCTGCTATTGTCACACCTATCACTAATGAGAATGTTAACAAGAGTGCAATAGAGACTCAAAGAGAGATTGCTTTGTACTGGAAGCGACTTGTGGATGGCAGAAGACTTGGAGCATGTTAG 1377 0.4466 MVITSTATHPDVQDERLSSTFGSRYVREPIPKFKLPEKSIPKDAAYQLINDELMLDGAPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIANLFHAPISEDETAVGTGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPAKAVEMVDENTICVAAILGSTMTGEFEDVKLLNELLTEKNKETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVRSINVSGHKYGLVYPGVGWVVWRSKDDLPDELGYKDIMANCWANARVLKEGIERIGRFNIISKDIGVPLVAFTLKDSSQHKVFEIADQLRKYGWIVPAYTMPPDAQHIEVLRVVIREDLNRNLAERLASDIEKVVLLLDTLPSPITTKAAIVTPITNENVNKSAIETQREIALYWKRLVDGRRLGAC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0344 458 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 303 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aed7g0344 458 Gene3D - 69 325 IPR015421 GO:0003824
Aed7g0344 458 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 303 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed7g0344 458 PANTHER GLUTAMATE DECARBOXYLASE 1 303 - -
Aed7g0344 458 Gene3D - 326 413 - -
Aed7g0344 458 PANTHER GLUTAMATE DECARBOXYLASE 1 303 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed7g0344 458 SUPERFAMILY PLP-dependent transferases 10 406 IPR015424 -
Aed7g0344 458 PANTHER GLUTAMATE DECARBOXYLASE 304 458 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed7g0344 458 Gene3D - 1 68 - -
Aed7g0344 458 PANTHER GLUTAMATE DECARBOXYLASE 304 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0344 Aed-Chr7 2508175 2512538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0344 1 458 Calmodulin-binding Proteins AT5G17330 68.317 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0344 K01580 - gmx:100783047 826.239