Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0342 ATGAATGCTTCAATGAGGAGAAAGGTTCAAAGGAAGTGTAAGATAAGAGGCTACAACCTCAAAGTCGATGCTCTCGACGAGATCCTCTCCTTCCCCTCTCGCATCGAAGGGGCCGACGAGAACGAAGCCATCGATATCCTCCTCGACGAGCTCGAAAAATCTCTGAAATCCACCATAATCGACAAGGAGACGGTGCAGCGCGTGGTGAGCCTGCTGCTGGAAGCCGACGAGGCAGTCGAGGAAAGCTCCTCCGCCTCCTCTTCCGCTCTTCGCATCATCGATGCGTTCCTCATCCCGAAGTATAAATACGACGCTGTCAGAAAGCAGTTCTACGTGCATGCAGGCAGCTTACCTATTCATGGAGAAGCATCAGCAAAATCAGCTCTGTACAGGGATCGGTTTCTCTTGTTGTCCCAGAGGCTGTCTCGTGACCAGCATTTTTCGAAACCTGCTTTTGAATCTGAATTTACACATTTTGGAAGCTGTGAGCATGGATGTATTGTCATCTGTTTCTTTGACATGCAATACAAGATAACTACAGGATTCTTTTCAGAGAACACTATAGTTGTGGCTGAAGGGGAGATGCTTGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCATTGGAGGATAGAGATAAGTCAGTTACACAACTTTCAGGGCATGACTTTTTTGGCGTGGGTACTTTTACTAAAGAAGAAACTATTAGACTGGCAGAGATGGAGGAAAGGGCGGTAAATGACATGTTTGTTATCCTTTCTGATATTTGGCTAGACAATGAAGAGGCTTTGAGAAAGCTAGAGACTGTTCTGGATGGCTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTCTTCTAAGCCATGTAACCTTTCATTTCATTATTATTCGACCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACACGACTAAAAGAGCACAGTAAATTCCTGTTTATTCCGGGTCCTGATGATGCAGGTCCTTCAACGGCTCTTCCTAGATGTTCTTTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATTCCCAATGCCATATTTTTAAGCAACCCGTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTTTTCCGTCAGGATATGCTGTATAGAATGCGCCGCTCATGTTTGATGCCTCCTTCTACAGAAGAGACCGATGATCATTTTCAACATCTTGTTGCTACCATAACCCATCAGAGTCATCTCTGTCCACTTCCGCTAACTGTACAACCCATCATTTGGAATTATGACCATTGTCTTCATCTTTATCCTACTCCACACACGATAGTCTTGGGTGACAGAAGTCAGCAGAAGGCATTCAAGTATACAGGAATCACTTGTTTTAATACTGGTTCCTTTGCAATTGACAGCACGTTTGTGGCATATCGTCCCTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAG 1485 0.4424 MNASMRRKVQRKCKIRGYNLKVDALDEILSFPSRIEGADENEAIDILLDELEKSLKSTIIDKETVQRVVSLLLEADEAVEESSSASSSALRIIDAFLIPKYKYDAVRKQFYVHAGSLPIHGEASAKSALYRDRFLLLSQRLSRDQHFSKPAFESEFTHFGSCEHGCIVICFFDMQYKITTGFFSENTIVVAEGEMLVEGIFQVLTCGFPPLEDRDKSVTQLSGHDFFGVGTFTKEETIRLAEMEERAVNDMFVILSDIWLDNEEALRKLETVLDGFESVEVVPSLFVFMGNFSSKPCNLSFHYYSTLRMQFGKLGEMIAAHTRLKEHSKFLFIPGPDDAGPSTALPRCSLPKYLTEELQKHIPNAIFLSNPCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSTEETDDHFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLHLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFAIDSTFVAYRPCSQEVELSAL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0342 494 PIRSF DNA_pol_epsilon_2 1 171 IPR016266 GO:0003677|GO:0006261|GO:0008622
Aed7g0342 494 PIRSF DNA_pol_epsilon_2 168 494 IPR016266 GO:0003677|GO:0006261|GO:0008622
Aed7g0342 494 Pfam DNA polymerase alpha/epsilon subunit B 252 457 IPR007185 GO:0003677|GO:0006260
Aed7g0342 494 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 5 162 IPR016266 GO:0003677|GO:0006261|GO:0008622
Aed7g0342 494 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 175 493 IPR016266 GO:0003677|GO:0006261|GO:0008622
Aed7g0342 494 Gene3D - 2 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0342 16 451 Core DNA Replication Machinery Family AT5G22110 64.668 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0342 K02325 - gmx:100784116 824.698