Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0340 ATGTGCAGTAGAGGGCATTGGAGGCCAGCTGAGGATGAGAATCTTCGAGAATTGGTGGAACGCTATGGACCTCATAATTGGAACGCCATAGCTGAGAAGCTCCGAGGAAGATCAGGGAAAAGCTGTAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAACAGAAGTCCATTCACAGAGGAAGAAGAAGAGAGACTTGTTGCTTCTCACAGGATTCATGGGAATAGATGGGCTGTAATTGCAAGACACTTCCCAGGAAGAACTGATAACGCTGTCAAAAACCATTGGCATGTCATGATGGCGAGGATTCGGAGAGAAACCTCTAAAATTTATAACAATCATCCAAAACAACAACATCATCATCAGCCACCTCTTTTATTCTCAGCTAATCCAACAAACATCATGCAGCAGCAGGATCAGGACCTTATAATTGAGACCATCCCAGCCACTTCTTCTTTTGTTGAAAAGTATTATCAAAAGTACAGCAGCCACAACCCTGCAGCTTGTGTCACACTCACACATACCCCTTTTCAATTTCCCAACAAGTTTTACTTTCAACACCCAACTTATGCAGCTTCAACAGTTCCTCCAGACAAGAGTACTACTCAATCAGTAGAGTTCTATGATTTTCTTCAAGTAAATACCGATTCCAACAAAAGTGAAGTGACAGACAGTGCCAGAATAAGAGACGAGGAGGAAGTAAGTCAAGAAGATGCTATAGTGGGACAGAAGAAGAACAAGGACAATGGTAGTAGTATTGTTCCATTCATTGATTTTTTGTCTACTGGAGGCTGCAGCTAA 804 0.4216 MCSRGHWRPAEDENLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLVASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRETSKIYNNHPKQQHHHQPPLLFSANPTNIMQQQDQDLIIETIPATSSFVEKYYQKYSSHNPAACVTLTHTPFQFPNKFYFQHPTYAASTVPPDKSTTQSVEFYDFLQVNTDSNKSEVTDSARIRDEEEVSQEDAIVGQKKNKDNGSSIVPFIDFLSTGGCS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0340 267 Pfam Myb-like DNA-binding domain 7 67 - -
Aed7g0340 267 MobiDBLite consensus disorder prediction 223 245 - -
Aed7g0340 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Aed7g0340 267 MobiDBLite consensus disorder prediction 222 248 - -
Aed7g0340 267 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Aed7g0340 267 Gene3D - 57 123 - -
Aed7g0340 267 SMART sant 55 103 IPR001005 -
Aed7g0340 267 SMART sant 3 52 IPR001005 -
Aed7g0340 267 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Aed7g0340 267 PANTHER MYB-RELATED PROTEIN A-LIKE 1 264 - -
Aed7g0340 267 CDD SANT 7 48 IPR001005 -
Aed7g0340 267 Gene3D - 4 55 - -
Aed7g0340 267 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Aed7g0340 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Aed7g0340 267 CDD SANT 58 101 IPR001005 -
Aed7g0340 267 PANTHER MYB PROTEIN-RELATED 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0340 Aed-Chr7 2485379 2487814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0340 1 264 MYB Transcription Factor Family AT1G17950 51.087 8.65e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed7g0340 Myb_DNA-bind_6 5.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0340 K09422 - gmx:100811746 363.614