Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0327 ATGGATGGTGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCGCCACGTCCTTTAACAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCAGAAAAACCTTTAATCGGAGGGCGCAATGCTGCAGTTTTAGCTGGCACTAATGGGGCATTTCACCATAGGGACATTGGTGGTATGCCTCAAGCTACATACCCTATGGAATACATGAGGGATGCGTGGATTAGTCAGAGAGACAAATATATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCAGAGACATCTTCAGCACACCAAATACAAATGATTCCACCACCAGAATTGCCTAAGGAAGAAAGGCCAGCAGAAGAGGCACCTGTTGTTGAGAAGGCAAATAGCGGCACTCGTAAGAAAAGACAAGGCCCCAAGGTGCCCAAATCTCCCAAGGCTAAGAAGTCCAAGAGGGGGCCTCGCGTGCCAAAGAATGAGAATGCTCCCTCAGTTCAACGTGCAAGGGTTCCAAAGAAAACTACAGAAATTGTAATAAACGGAATTGATATGGATATTTCTAGTATTCCGATTCCTGTTTGTTCATGTACTGGAACGCCCCAACAATGTTATAGATGGGGCTCTGGTGGTTGGCAGTCTGCATGTTGCACGACAGGCATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGAGTGGTGCTAGGATTGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTGTTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 852 0.4495 MDGDNGLNIRNWGYYEPATSFNSHLGLQLMSSMPEKPLIGGRNAAVLAGTNGAFHHRDIGGMPQATYPMEYMRDAWISQRDKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEERPAEEAPVVEKANSGTRKKRQGPKVPKSPKAKKSKRGPRVPKNENAPSVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRSGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0327 283 MobiDBLite consensus disorder prediction 135 154 - -
Aed7g0327 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Aed7g0327 283 MobiDBLite consensus disorder prediction 114 134 - -
Aed7g0327 283 PANTHER - 1 283 IPR010409 -
Aed7g0327 283 SMART GAGA_bind_2 1 283 IPR010409 -
Aed7g0327 283 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 283 - -
Aed7g0327 283 MobiDBLite consensus disorder prediction 109 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0327 Aed-Chr7 2365879 2366730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0327 1 283 BBR or BPC Transcription factor family AT2G01930 51.505 2.94e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aed7g0327 GAGA_bind 2e-110 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0327 7 2365879 2366730 Aed7g0327 7 2365879 2366730 ECH