Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0324 ATGGAGAACTCATCATCTTCATCTTCATCTTCGAACTATCTCTACCGAGAGTGTCTCCGCAACCATGCAGCCAGCCTTGGCAGCTATGCCACGGACGGCTGCGGGGAGTTCACTCTTGACGTGGACAGCGTCTCGTCCCCGTCCCTCCAGTGCGCAGCCTGCGGCTGCCACCGCAACTTCCACCGAAAGGTCACGTGCCCTGCTGCGGTAGAAGGGATGGTCGTAACTGGAGGGAGTGGGGACATGATGGAGTACTCAGGAGGAGGCGGAGACGGTGGTGGAGGGAGCAAGAAGAGGTTCAGGACGAAGTTTAGCGCTGAGCAGAAGGAGAAGATGCTGGGGTTCACACGATCTGCAGGTTGA 363 0.5813 MENSSSSSSSSNYLYRECLRNHAASLGSYATDGCGEFTLDVDSVSSPSLQCAACGCHRNFHRKVTCPAAVEGMVVTGGSGDMMEYSGGGGDGGGGSKKRFRTKFSAEQKEKMLGFTRSAG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0324 120 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 15 64 IPR006456 -
Aed7g0324 120 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 15 63 IPR006456 -
Aed7g0324 120 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 10 117 - -
Aed7g0324 120 Pfam ZF-HD protein dimerisation region 13 65 IPR006456 -
Aed7g0324 120 Gene3D - 83 120 - -
Aed7g0324 120 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 10 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0324 Aed-Chr7 2331991 2332745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0324 15 120 ZF-HD Transcription Factor Family AT4G24660 40.152 4.22e-24 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aed7g0324 ZF-HD_dimer 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0324 - - gmx:547765 175.637