Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0318 ATGCCCCAGAATAAGATTATCCAAGACCAACAACAATCATCGAATCCGATTATTCCTGATCTTTCTCTTCACATTAGCCTTCCAAACAGTGCTCCTTCTTCAATTTGCACTGAAGGGAATTCACCCTTTGATACATGGCCACAACAAGCATATGATGCTGCTGAAGGTCTCAAATCATCACACAGTGATGGTTCAATCAAAGGTAGTAGTAGTAGTAGCCCTTATCACACAGACACACAACTTTCCTTGGCCAACTCCACAACTACTACTACTACTTTTACTTCTACTCCCTCTGAGGCTGAAAGCACTTGGAAGAAGAGAAACTTTGTTAGGCTTTGTCATGAGGGTCAAATAAGACTCATCAATGGAATCCCTCTCTACAGTAACAACCTTTCTTCTTCTCTGGACAGCAATAGTACTGTTCCCTCAATAGAGAGAAACAACCCCACCAATAATAAGTTTTCCTTTTCTTCTCATCTATATGCACTTCCACACCCTCCTTATTCTGCCAATTCAGCTCCTAATTATGTTGTTGGGGGTGTAGCAGCAGTAGAACCAATCTCAAGGTTTCGTGAGATAACCATGGAGAGTAGTAGACCCCAACAGTTTCAGTACTTTGATTACCATCATCAGCAGCATCAGTTTGGGAGTAGTAATAATATTGGAGCTGCTTCTGATTTCTCAAATGGATTTGTGAGGTCAAGAATGTTGTCAAGGCATCAAAGTAATAAGAGGAACAATAGGGCTCCAAGAATGCGTTGGACTAGTTCTCTTCATAATCGCTTTATTCACGCTGTTGAGCTTCTTGGTGGCCATGAAAGGGCTACTCCAAAGTCAGTTTTGGAGCTCATGGATGTAAAAGATCTAACACTAGCTCATGTCAAGAGTCATTTGCAGATGTATCGGACTGTTAAGAACACTGACAAACCTGCAGCTTCTTCAGATGGGGATGAGGATTTCATGTCCATAACAATACCAAATAATCAAAATAAGAATTTTTTACCCAATCAGAGAGGAATTTCAAATGCATCCATAGATAATGATATGGGCTACACTTCCAGCAATCTATGGGTTAATTCTTCTTCCAGTAGAGGAGCACGGATACAATCTAATTCCCCAGACTTGGATGAGCTTAGTCCACAAGAAATCCTAGCATCTCAGCATTCTGATAAAATTTCAGAGGGTAGCAACTACATACAAACAAGAAGCTTCAACAAGGATCAAAATCCAAGCTTGGAGTTCACCTTAGGGAGATGA 1257 0.4073 MPQNKIIQDQQQSSNPIIPDLSLHISLPNSAPSSICTEGNSPFDTWPQQAYDAAEGLKSSHSDGSIKGSSSSSPYHTDTQLSLANSTTTTTTFTSTPSEAESTWKKRNFVRLCHEGQIRLINGIPLYSNNLSSSLDSNSTVPSIERNNPTNNKFSFSSHLYALPHPPYSANSAPNYVVGGVAAVEPISRFREITMESSRPQQFQYFDYHHQQHQFGSSNNIGAASDFSNGFVRSRMLSRHQSNKRNNRAPRMRWTSSLHNRFIHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSITIPNNQNKNFLPNQRGISNASIDNDMGYTSSNLWVNSSSSRGARIQSNSPDLDELSPQEILASQHSDKISEGSNYIQTRSFNKDQNPSLEFTLGR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0318 418 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 418 IPR044847 GO:0000976|GO:0006355|GO:0010158
Aed7g0318 418 MobiDBLite consensus disorder prediction 364 418 - -
Aed7g0318 418 Pfam Myb-like DNA-binding domain 251 302 IPR001005 -
Aed7g0318 418 SUPERFAMILY Homeodomain-like 248 304 IPR009057 -
Aed7g0318 418 MobiDBLite consensus disorder prediction 62 100 - -
Aed7g0318 418 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 250 303 IPR006447 GO:0003677
Aed7g0318 418 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 418 - -
Aed7g0318 418 MobiDBLite consensus disorder prediction 53 100 - -
Aed7g0318 418 Gene3D - 249 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0318 Aed-Chr7 2285824 2293866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0318 230 418 G2-like Transcription Factor Family AT5G16560 52.261 2.54e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed7g0318 Myb_DNA-binding 8.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0318 - - gmx:100796973 593.193