Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0309 ATGTGCAAGTTTGGAGAAAAAGATGAAGATAAAGCCCTTGTTGAGGCACTTCAAGTTGGTGCCTTTCAAAAGCTGTTGCTGGTGTTGCAAGTTGGATGTGGTGATGAGACTAAGGACAAAGCAACTGAACTTCTCAAACTGCTTAATCCTTACAGGGCTGATTTGGAATGCATAGACTCAGATTACAAAAATGTTAAGAGATCATTTTAA 210 0.3905 MCKFGEKDEDKALVEALQVGAFQKLLLVLQVGCGDETKDKATELLKLLNPYRADLECIDSDYKNVKRSF 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0309 69 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 69 - -
Aed7g0309 69 PANTHER WDSAM1 PROTEIN 1 69 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0309 Aed-Chr7 2238952 2239161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0309 12 69 U-box Gene Family AT5G37490 52.459 1.92e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0309 - - gmx:100817623 131.724