Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0307 ATGGCCCTTGTCCGCCACCGCCGCCAACCCAATCTCCGCCTCCCCATCCCGGAGCCCTCCGAGCGCCGCCCCCGCTTTCCCCTACCACTCCCTCCCACCACCACCGCCGCCTCCAAACCCGCCTCCGCCGACGCCATCGCCTCCGCCGACCTCGAGAAGCTCACCGTCCTCGGCCACGGCAACGGAGGCACCGTCTACAAGGTCCGCCACAAGGCCACATCCGCCACCTACGCGCTCAAAATCATCAACGCCGACGCCGACGCCACCATGCGCCGCCGCGCCCTCTCGGAAACCTCCATCCTCCGTCGCGCCACCGATTGCCCCCACGTCGTCCGCTTCCACGGCTCCTTCGAGAAGCCCTCCGGCGACGTGGCGATCCTCATGGAGTACATGGACAACGGCACCCTCGAGACCGCCCTCTCCACCGGCGGCACTTTCTCGGAAGAGCGACTCGCCAAGGTGGCGCGTGACATTCTCAGCGGACTCGCGTACCTCCACGCGCGCAACATCGCGCACCGCGACATAAAGCCCGCGAACATCCTAGTAAACTCCGAAGGAGAGGTTAAGATTGCAGACTTCGGAGTCAGCAAACTCATGTGCCGCACGCTCGAAGCGTGCAACTCCTATGTCGGCACGTGCGCGTACATGAGTCCCGACCGGTTCGACCCGGAAGCCTATGGCGGGAACTATAACGGTTTCGCTGCGGATATTTGGAGTTTGGGTTTGACCCTATTTGAACTCTATGTGGGTCACTTCCCGTTTCTTCAAGCGGGTCAGAGACCCGATTGGGCTACCCTCATGTGTGCCATTTGCTTTGGCGATCCGCCCAGCCTGCCCGAAACGGCGTCGTCGGATTTTCACAACTTTGTCAAGTGCTGCCTCAAGAAGGAGTCCGGGGAGAGGTGGACGGCGGCTCAGCTCTTGACCCACCCGTTTGTGTGCAAAGATCCGGAAACTTGTTAA 963 0.622 MALVRHRRQPNLRLPIPEPSERRPRFPLPLPPTTTAASKPASADAIASADLEKLTVLGHGNGGTVYKVRHKATSATYALKIINADADATMRRRALSETSILRRATDCPHVVRFHGSFEKPSGDVAILMEYMDNGTLETALSTGGTFSEERLAKVARDILSGLAYLHARNIAHRDIKPANILVNSEGEVKIADFGVSKLMCRTLEACNSYVGTCAYMSPDRFDPEAYGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWATLMCAICFGDPPSLPETASSDFHNFVKCCLKKESGERWTAAQLLTHPFVCKDPETC 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0307 320 MobiDBLite consensus disorder prediction 1 42 - -
Aed7g0307 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Aed7g0307 320 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 2 316 - -
Aed7g0307 320 CDD PKc_MAPKK_plant_like 51 313 - -
Aed7g0307 320 ProSiteProfiles Protein kinase domain profile. 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0307 320 SUPERFAMILY Protein kinase-like (PK-like) 50 315 IPR011009 -
Aed7g0307 320 Pfam Protein kinase domain 52 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0307 320 SMART serkin_6 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0307 320 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Aed7g0307 320 Gene3D Phosphorylase Kinase; domain 1 42 126 - -
Aed7g0307 320 Gene3D Transferase(Phosphotransferase) domain 1 127 319 - -
Aed7g0307 320 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0307 Aed-Chr7 2219339 2220301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0307 1 316 MAP Kinase Kinase Gene Family AT1G73500 59.621 3.42e-130 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aed7g0307 Pkinase 5.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0307 K20604 - gmx:100804100 553.518