Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0303 ATGAGTTCCCAACTTCGAAGAGAAAGAAGGGACCGGTCCAGGATTCCATCACAAGGTGGTGCTACTCGTCAAGAATGGGTTCCCAGAGGGGTTGATCCTGCGTCCACCACTGTTGCTCAGCCATCAAATTTGCATTCAAACAACAATGCTGGTGCTGCTTCTGCCAATCAAGGGGTGGCTGTTGCTGCTCCTACTCCTACTCCTACTGTCAATCGCGGTACAAGCAACAATCATCATGGGAATGATGCTGGTTCTTCCAATCAAGGCGGGTCTGTTGCTGCTCCTACTATGGTGAATCGGGGCAGAAGCAACAATCGTGGGAATGATGCTGGTTCTTCCAATCAAGGGGTGGCCCTTGCCCCGTTGGCAAGTCGCAATAGAAGCAACATTTATGGGAATGATTCTGGTTCTTCCAATCATGGGGTGGCTGTTGCTGCAGCAGCGAGTCGTGTTAGAAGCAACAATCATGGGAATCATAGGATGGAAAGGGAAAGAGAAAGGGACAAGGGGGGCAGAATTGGGATTGTGGAGAAGGGAGTGGGAGTGGGAGTCAGAGACTCTAGTTTGCCTCAATTGGTGCAGGAGATTCAGGAGAAGCTCTTGAAAGGTACTGTGGAGTGCATGATTTGCTATGAGATGGTCCAGAGGTCTGCGCCGGTTTGGTCTTGCTCCAGCTGTTACTCTATCTTTCACCTGAACTGCATCAAGAAGTGGGCCAGGGCACCCATCTCATGTGATTTGTCCTTGTCTGTGGAGAATAATCTAGAGCTTAATTGGCGGTGTCCTGGTTGTCAGTCTGTGAAATTTACCTCTTCAAAGGACATTAGGTATGTTTGCTTTTGTAGGAAGAGGATAGACCCTCCATCTGATTTGTATCTGACACCACATTCGTGTGGAGAACCATGTGGGAAGCCTCTTGAGAAGGAGGTGTTAGTTGCTGGAGGGAATAGGGATGATCTTTGTCCTCATGTTTGTGTCTTGCAATGCCATCCAGGACCATGCCCTCCCTGTAAAGCATTTGCTCCTCCGCAGTTGTGCCCTTGTGGGAAGAAAAACATTACCACCCGTTGCTCTGATCGGAAGTCTGTTCTTACCTGTGGACAGTGCTGTGCTAAATTTCTTGAATGTGGGCGCCATCACTGTGAACGCATTTGTCATGTGGGTCCATGTGATCCTTGTAAGGTTCCAATCAGTGCCTCTTGCTTTTGTAGTAAAAAGACGGAGGTTGTTCCTTGTGGGGACATGGTTGTGAAGGGTGAAATTGAAGCAAAAGGCGGGTTGTTTTCTTGTGGTTCATATTGTCCAAAGAAACTTGGTTGTGGTAAGCATGTCTGTAGTGAGATTTGTCATCCAGGCAGCTGTGCAGTATGTGAATTTTTACCTAGCCTGGTTAAGACATGCTGTTGTGGGAAAACAAGGTTGGAGAATGAACGCCAGAGTTGTTTGGATCCGATACCCACCTGCTCTAAAGTATGTGGTAAGCTGCTTCATTGTGAACTGCATAGTTGTAAAGAGGCATGTCATGTTGGGGAGTGTCCACCTTGTTTGGTTCAGGTTTCACATAAGTGCCGTTGTGGCTCAACTTCCCAATCTGTGGAGTGCTATAAGACTATGATGGAGAATGAGATATTTATGTGTGAAAAGTCTTGTGGGATAAAAAAGAATTGTGGAAGGCATAGATGTAGTGAAAGGTGTTGTCCATTTTCTGATTCAAATAGTTATAATACCTTCAGTGGGGATTGGGTTCCTCACTTTTGTTCCATGCCATGTGGAAAGAAGCTAAGGTGTGGCCAGCATGTGTGTGAATGTCTGTGTCACAGTGGTCATTGTCCACCTTGTTTCCAAACAATCTTTAATGAATTGACTTGTGCTTGTGGTGGGACTTCAAGGCCTCCTCCTCTACCTTGTGGTACCCCGCCTCCCTCATGTCAGCTTCCATGCTCGGTTCCTCAGCCATGTGGCCATTCAGGCTCACACAGTTGCCATTTTGGAGACTGTCCTCCTTGTTCAGTGCCAGTAGCAAAAGAATGTATTGGTGGGCATGTAGTTCTTAGAAACATACCATGTGGTTCGAAGGATATTAGATGCAATCATCCCTGTGGGAAGACCAGGCAGTGTGGTTTACATGCATGTGGTAGAACATGTCACCCCCCACCTTGTGATAATCTATCTGGGGTTGTGCAAGGTTTCAAAGCACCGTGTGGCCAAACATGTGGTGCTCCAAGAAGAAGCTGTCGGCACACATGTATGGCTCCTTGTCACCCTTCATCTCCATGCCCAGATATAAGATGCGAATTCTCTGTTACAATCACTTGCTCTTGTGGCCGTATAACTGCAAATGTTCCTTGTGATGCTGGTGGTAGCAGTAGCAATTATAACGCTGATGCCATACATGAAGCTTCCATTATTCAAACATTACCTGTACCACTTCAACCAGTTGATGCAAGTAGCAAGAAAGTTCCCCTAGGACAAAGAAAGCTGATATGTGACGATGAATGTGCTAAGCTGGAACGCAAAAGGGTTCTTGCTGATGCCTTTGACATTACTGCTCCAAATCTGGACGCTCTCCATTTTGGTGATAACTCTCTTTCTTCTGAATTGCTTTCTGATATCTTCAGGCGTGAGCCAAAATGGGTTTTAGCTGTTGAGGAGAGATGCAAAATTTTAGTACTTGGCAAGAGTAGAGGAACTACACATGGTTTAAAAGTCCACATTTTTTGTGCCATGCTGAAGGAAAAAAGAGATGCAGTGAGGTTGATTGCTGATAGATGGAAGCTTGCAGTCAATGCTGCCGGCTGGGAGCCAAAGCGATTTATTGTAATTTCTGTTACCCAAAAATCAAAGGTCCCGGCTCGTGTGATAGGGGTTAAGGGTACTACCACATTAAATGTGCCGCTTCCTCCTGTATTTGATCCATTGGTTGATATGGATCCGCGACTTGTTGTCTCGTTTCCCGACTTACCAAGGGATACTGAAATTAATGGCTTGGTGTTGAGGTTTGGTGGCGAGTGTGAGCTTGTTTGGTTGAACGATAAGAATGCTTTGGCTGTTTTTCATGATCCTGCCCGAGCTGCAACTGCAATGAGGAGGTTGGATCATGCAACAGTTTATCAGGGAGCTGTTTTGGTTGCTCCGAATGCGGGGGCATTGGCGGCATCTTCAACTGCCAATGCCTGGGGAGGAGCTGGGGCGATGAAAGGAGGAGCACTGCCAGCATTGAAAAGTAATTCATGGAAAAAGGCTGTGGGTTGGGAAGATTCTTGGGGAGGTGAAGAGTGGACTGCTGGTTCTGCAAATATCCAGCCATCTGCTTGGAAGAAAGAAGCACCTCTAGCTGCTTCTTTAAATCGTTGGAATGTCTTGGAGCAGGAGTCAAGTTCAAGTTCATCGGTTACAACTGTTAGAGCTGAAGATTCCGGGAAGCAAACTGAAAATACTGGCTCAAAGGAAGAGGAAAACTTGGATGCAGCTTCTGCAGTAGTTGATGATTGGGAGAAGGCTTATGAATGA 3510 0.465 MSSQLRRERRDRSRIPSQGGATRQEWVPRGVDPASTTVAQPSNLHSNNNAGAASANQGVAVAAPTPTPTVNRGTSNNHHGNDAGSSNQGGSVAAPTMVNRGRSNNRGNDAGSSNQGVALAPLASRNRSNIYGNDSGSSNHGVAVAAAASRVRSNNHGNHRMERERERDKGGRIGIVEKGVGVGVRDSSLPQLVQEIQEKLLKGTVECMICYEMVQRSAPVWSCSSCYSIFHLNCIKKWARAPISCDLSLSVENNLELNWRCPGCQSVKFTSSKDIRYVCFCRKRIDPPSDLYLTPHSCGEPCGKPLEKEVLVAGGNRDDLCPHVCVLQCHPGPCPPCKAFAPPQLCPCGKKNITTRCSDRKSVLTCGQCCAKFLECGRHHCERICHVGPCDPCKVPISASCFCSKKTEVVPCGDMVVKGEIEAKGGLFSCGSYCPKKLGCGKHVCSEICHPGSCAVCEFLPSLVKTCCCGKTRLENERQSCLDPIPTCSKVCGKLLHCELHSCKEACHVGECPPCLVQVSHKCRCGSTSQSVECYKTMMENEIFMCEKSCGIKKNCGRHRCSERCCPFSDSNSYNTFSGDWVPHFCSMPCGKKLRCGQHVCECLCHSGHCPPCFQTIFNELTCACGGTSRPPPLPCGTPPPSCQLPCSVPQPCGHSGSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNHPCGKTRQCGLHACGRTCHPPPCDNLSGVVQGFKAPCGQTCGAPRRSCRHTCMAPCHPSSPCPDIRCEFSVTITCSCGRITANVPCDAGGSSSNYNADAIHEASIIQTLPVPLQPVDASSKKVPLGQRKLICDDECAKLERKRVLADAFDITAPNLDALHFGDNSLSSELLSDIFRREPKWVLAVEERCKILVLGKSRGTTHGLKVHIFCAMLKEKRDAVRLIADRWKLAVNAAGWEPKRFIVISVTQKSKVPARVIGVKGTTTLNVPLPPVFDPLVDMDPRLVVSFPDLPRDTEINGLVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHATVYQGAVLVAPNAGALAASSTANAWGGAGAMKGGALPALKSNSWKKAVGWEDSWGGEEWTAGSANIQPSAWKKEAPLAASLNRWNVLEQESSSSSSVTTVRAEDSGKQTENTGSKEEENLDAASAVVDDWEKAYE 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0303 1169 MobiDBLite consensus disorder prediction 149 168 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 488 536 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 586 630 - -
Aed7g0303 1169 Pfam NF-X1 type zinc finger 706 721 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 323 338 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 596 613 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 556 567 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 440 457 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 492 515 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 738 763 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 376 394 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 Pfam NF-X1 type zinc finger 653 670 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 MobiDBLite consensus disorder prediction 1 116 - -
Aed7g0303 1169 SMART znfxneu3 321 339 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 SMART znfxneu3 440 459 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 SMART znfxneu3 596 615 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 SMART znfxneu3 498 517 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 SMART znfxneu3 653 671 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 SMART znfxneu3 706 736 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 SMART znfxneu3 745 766 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 SMART znfxneu3 376 395 IPR000967 GO:0005634|GO:0008270
Aed7g0303 1169 MobiDBLite consensus disorder prediction 1 16 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 430 475 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 734 783 - -
Aed7g0303 1169 ProSiteProfiles Zinc finger RING-type profile. 207 265 IPR001841 -
Aed7g0303 1169 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 183 1162 - -
Aed7g0303 1169 MobiDBLite consensus disorder prediction 1122 1141 - -
Aed7g0303 1169 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 183 1162 IPR034078 GO:0003700
Aed7g0303 1169 SUPERFAMILY RING/U-box 197 268 - -
Aed7g0303 1169 MobiDBLite consensus disorder prediction 1122 1169 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 643 691 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 696 754 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 298 359 - -
Aed7g0303 1169 CDD NF-X1-zinc-finger 366 414 - -
Aed7g0303 1169 ProSiteProfiles Zinc finger PHD-type profile. 204 267 IPR019787 -
Aed7g0303 1169 MobiDBLite consensus disorder prediction 35 116 - -
Aed7g0303 1169 CDD RING-CH-C4HC3_NFX1 206 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0303 Aed-Chr7 2184505 2188014 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Aed7g0303 zf-NF-X1 20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0303 K12236 - gmx:100789059 2025.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0303 7 2184505 2188014 Aed7g0303 7 2184505 2188014 ECH