Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0295 ATGCCATTGATTCACGCTACTCCACCGCTTCACTATGCCATTTCCACCCTCACCACAGTTACCAATGCACCATCATCATCTTCTTCCACTCTCTCTGCTGCCACATTCGGTTCCAGTTTTCTGCACAAAATCCAGAACCCAATTTTTCGGTTTTCCACCACCAGGAATCGCTCGCGTACTGCACTAATCAGAGCCAAAGCTGGGACCGATTACTACTCCACGTTGAACATTACCCCCAATGCCACGCTGCAAGAAATCAAGGCCTCCTATCGCAAACTGGCGCGAAAGTACCATCCAGATATGAACAAAAACCCTGGGGCTGAGGATAAGTTCAAGGAAATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGGGTCAACTGGTGCTACAGGGGTTGATCCTTTTGATTTATTTGAGACATTCTTTGGTCGTTCTGATGGAGTATTTGGAGATGGTGATGAAGGGAGCATCAACTTCAATTTTAGAAACAAGAGAAACCGTGGTCATGATGTTCGATATGACCTTCATTTGAGCTTTGAAGAATCAATATTTGGAGGACAGAGGGAGATTGAAGTTTCCTGTTTTCAGACATGTAATGCGTGTGATGGTACAGGAGCTAAATCAAAGAATTGCATTAAACAATGCACAAATTGTGGTGGCAGAGGGGGAGAAATGAAAACTCAGAGAACACCCTTTGGAATGATGTCTCAGGTTTCTACTTGCTCTAAGTGTGGTGGCCTTGGCAAAATAATCACCGATCACTGTCGAAGGTGTGATGGCAGTGGTCAGGTGCAATCTAAAGAAACAATGGAAGTGGAAATTCCTCCTGGAGTCAATGATGGAGACACAATGCAAATTCAAGGAAAAGGGAATTTTGATAAAAAGAGGCAAATTACTGGGGATCTTTATGTTGTCCTGCATGTAGATGAAAAGCAGGGAATTTGGAGAGAGGGTCTTCATTTGTACTCAAAGATTAGCATTGACTTCACAGATGCAATATTAGGGTCAGTTAAAAAGGTAGAAACCGTTGAAGGTTTACGGGCTCTTCAAATTCCTTCAGGGATTCAACCTGGAGATTCACTGAAGTTGTTGCATTTGGGAGTTCCAGACATAAATAAACCATCTGTTCGAGGCGATCATTATTTCATTGTGAATGTTCTTATTCCCAAGGATATCAGTGGCGCCGAACGTGTACTTGTTGAGCAGTTAGCTTCACTAAGAGCATCTAGCAAAAGGGATTCACTGTCTTCTAATGACAATGGGATACCTAAAGGAAAATTCAATGAATTTATAACGAGGGATCCAAAAGGCGATGCCTCAAGCAAGGGAATAAATAATGATGGGTCTCTATGGGGATCAATCAAAAACTTCTTAAGGGGAGGACAGTCTAAAGAAAGGTTTGCCTCAATCAGCATGGATACGACAGCATTATTATGGAGATCCGGCCACCAAAATCCTGCCCCTGATTACTTTTTTGTTGTTTTCATTATAACTTGGATTCTTGCCTCTATAGCAAAGTCTAAGTACTCATTACTTCAAAAAAGATCCGAGTCCTTTAATAGAACACAGAGTGAAAATAATTAA 1641 0.4174 MPLIHATPPLHYAISTLTTVTNAPSSSSSTLSAATFGSSFLHKIQNPIFRFSTTRNRSRTALIRAKAGTDYYSTLNITPNATLQEIKASYRKLARKYHPDMNKNPGAEDKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGSTGATGVDPFDLFETFFGRSDGVFGDGDEGSINFNFRNKRNRGHDVRYDLHLSFEESIFGGQREIEVSCFQTCNACDGTGAKSKNCIKQCTNCGGRGGEMKTQRTPFGMMSQVSTCSKCGGLGKIITDHCRRCDGSGQVQSKETMEVEIPPGVNDGDTMQIQGKGNFDKKRQITGDLYVVLHVDEKQGIWREGLHLYSKISIDFTDAILGSVKKVETVEGLRALQIPSGIQPGDSLKLLHLGVPDINKPSVRGDHYFIVNVLIPKDISGAERVLVEQLASLRASSKRDSLSSNDNGIPKGKFNEFITRDPKGDASSKGINNDGSLWGSIKNFLRGGQSKERFASISMDTTALLWRSGHQNPAPDYFFVVFIITWILASIAKSKYSLLQKRSESFNRTQSENN 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0295 546 Hamap Chaperone protein DnaJ [dnaJ]. 67 476 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aed7g0295 546 Gene3D - 187 323 - -
Aed7g0295 546 Gene3D DnaJ domain 67 170 IPR036869 -
Aed7g0295 546 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 77 431 - -
Aed7g0295 546 Pfam DnaJ C terminal domain 190 408 IPR002939 -
Aed7g0295 546 PANTHER EXPRESSED PROTEIN 77 431 - -
Aed7g0295 546 SUPERFAMILY Chaperone J-domain 68 169 IPR036869 -
Aed7g0295 546 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 204 284 IPR036410 -
Aed7g0295 546 CDD DnaJ_C 189 411 - -
Aed7g0295 546 SUPERFAMILY HSP40/DnaJ peptide-binding domain 189 327 IPR008971 GO:0006457|GO:0051082
Aed7g0295 546 SMART dnaj_3 69 126 IPR001623 -
Aed7g0295 546 Gene3D - 217 281 - -
Aed7g0295 546 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Aed7g0295 546 Pfam DnaJ central domain 217 281 IPR001305 GO:0031072|GO:0051082
Aed7g0295 546 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 416 IPR008971 GO:0006457|GO:0051082
Aed7g0295 546 CDD DnaJ 70 123 IPR001623 -
Aed7g0295 546 PRINTS DnaJ domain signature 90 105 IPR001623 -
Aed7g0295 546 PRINTS DnaJ domain signature 106 126 IPR001623 -
Aed7g0295 546 PRINTS DnaJ domain signature 72 90 IPR001623 -
Aed7g0295 546 PRINTS DnaJ domain signature 126 145 IPR001623 -
Aed7g0295 546 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Aed7g0295 546 Gene3D - 334 425 - -
Aed7g0295 546 Pfam DnaJ domain 70 131 IPR001623 -
Aed7g0295 546 ProSiteProfiles Zinc finger CR-type profile. 204 286 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0295 Aed-Chr7 2131848 2138255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0295 71 131 C2H2 Transcription Factor Family AT1G74250 41.791 1.07e-06 49.7