Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0294 ATGCAACAACATTCTCACACCCTCTTCGCCACCATCCTCTTTGTGTTTTTCTTCTTCCCTTCAACATTTTCTGACATTTCATCGGAGCGCGCGGCGCTCCTCGCCCTCCGCTCCGCCGTGCGCGGCCGCACCCTCCTCTGGAACGCCACCGCCCCCTTGCCCTGCGCCTGGCCCGGCGTCCAATGCGACGCCGCCAGCGCCACCGTGGTCGAGCTCCACCTCCCCGCCGTCGCACTCTCCGGTGAGCTCCCCACCGGCGTTTTCCCGGCGCTGCCCAACCTCCACACTCTGAGCCTCCGCGTGAACTCCCTCTCCGGCACCCTCCCCGCCGACCTCGCCGCCTGTGCCGCCCTCCGCAACCTCTTCCTCCAGCAGAACCACTTCTCCGGCGAGGTTCCGGCGTTCCTCTCCGGCATGACCGGCCTCGTCCGGCTCAACTTGGCCTCCAACAACTTTTCCGGTACAATTTCGTCCCGGTTCGGGAACCTCACCCGGTTGAGAACCCTTTTCCTTGAGAACAACCGATTCAACGGTTCGCTTCCCGGTTTGGAAAAACTCGATGATTTGGCTCTTTTTAATGTCTCTAACAACATGTTAAACGGTTCTGTGCCTAAAAAGTTGCAGACTTTTGGTGAAGATTCGTTTATGGGGAATTCCCTTTGTGGGAAGCCACTTGGGATTTGTCCTTGGGATGATGGGGATGGTGAGACTAGTGTAAATGGGAGTTCAAATTCAAGTGGGGTTGGAGAGGGTGTGATGGGAGGGGGAAAGAAGAAGAAAGGGAAGCTTTCTGGGGGCGCAATTGCTGGGATTGTTATTGGGAGTGTGGTGCTTCTTTTGTTGATTGTGTTTGCTTTGATTCTCTCGTGTAGAAGTGGGAACAAGACTAGGAGTGTTGATAATGTCAATAACATTGTGGGGTTGAAGGTGGAGCAGCAACAGCATGGGGAGGTGGGAATTGAGGGTGGCAATGTGGAGAATGGTGGTGGTGGGAATTCTGTGGCTGCAGCGGCCGCGGCGGTGGCAGCCGTGAGTGGTGGAGGTGGTGGTGGAGAAAAGAAGTTGGTGTTTTATGGTAATAAGGTGAAGGTGTTTGATTTGGAGGATTTGCTTAGAGCTTCGGCCGAGGTGTTGGGGAAAGGGACTTTTGGAACTACCTACAAGGCTGTTTTGGAGGAGGGACCTGTGGTGGCTGTGAAGAGATTGAAGAATGTGACGGTTTCGGAAAAGGAGTTTAAGGAGAAGATTGATGGGGTGGGAGTGATGGATCATGAGAATTTGGTGCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAACTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGAGTGGAGTTCTGAGGTGTTTGATATTGAGCTCCTTAGGTATCAGAATTCTGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTTGTTCCATACCCTGATAGCCGCCCTTCAATGTCCCAAGTGAGACAACGCATACAAGAGTTACATAACTCTACCATCAAAGACCAAATCCAACAACCTGATTTCATCGATGATATAGAGGATGTGTCTTCTAGATGA 1602 0.5225 MQQHSHTLFATILFVFFFFPSTFSDISSERAALLALRSAVRGRTLLWNATAPLPCAWPGVQCDAASATVVELHLPAVALSGELPTGVFPALPNLHTLSLRVNSLSGTLPADLAACAALRNLFLQQNHFSGEVPAFLSGMTGLVRLNLASNNFSGTISSRFGNLTRLRTLFLENNRFNGSLPGLEKLDDLALFNVSNNMLNGSVPKKLQTFGEDSFMGNSLCGKPLGICPWDDGDGETSVNGSSNSSGVGEGVMGGGKKKKGKLSGGAIAGIVIGSVVLLLLIVFALILSCRSGNKTRSVDNVNNIVGLKVEQQQHGEVGIEGGNVENGGGGNSVAAAAAAVAAVSGGGGGGEKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVLEEGPVVAVKRLKNVTVSEKEFKEKIDGVGVMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDSRPSMSQVRQRIQELHNSTIKDQIQQPDFIDDIEDVSSR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0294 533 Gene3D Ribonuclease Inhibitor 26 222 IPR032675 -
Aed7g0294 533 SUPERFAMILY Protein kinase-like (PK-like) 376 470 IPR011009 -
Aed7g0294 533 ProSiteProfiles Protein kinase domain profile. 372 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0294 533 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Aed7g0294 533 PANTHER OS05G0588300 PROTEIN 457 533 - -
Aed7g0294 533 Pfam Protein kinase domain 375 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0294 533 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Aed7g0294 533 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 457 533 - -
Aed7g0294 533 Gene3D Phosphorylase Kinase; domain 1 351 446 - -
Aed7g0294 533 MobiDBLite consensus disorder prediction 236 255 - -
Aed7g0294 533 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Aed7g0294 533 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 457 - -
Aed7g0294 533 SUPERFAMILY L domain-like 47 207 - -
Aed7g0294 533 PANTHER OS05G0588300 PROTEIN 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0294 Aed-Chr7 2118961 2121459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0294 447 522 Receptor kinase-like Gene Family AT1G48480 37.662 9.55e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed7g0294 Pkinase 6.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0294 - - gmx:100781597 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0294 7 2118961 2121459 Aed5g2661 5 27155290 27158412 ECH
Aed7g0294 7 2118961 2121459 Aed7g0294 7 2118961 2121459 ECH
Aed5g2661 5 27155290 27158412 Aed7g0294 7 2118961 2121459 PCT