Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0292 ATGCAGTGGTCATTCCCAAACAAGGTGTCAGCCGTTCCTCAATTCCTGTCCTTCAAGACTAATCAGGAAGACAGGCCTAGAAAGACTATTCTTGAGCCACTAGCTTCATCTTCATATATGACCATGTCAACCAAAGATGCTTTTGACTCTAACCAGAAACCATTCTTGGGTCTCACCCAGAGAAATTTGTCTATAGGCAAGCATGGTGCAGGAAACAAACAAGGAATATTTTCAGTTTCCAACCAATCAAATCAAGTGAGTCCTGTTCTTCAATCTAATCTTGTTACTACCGGACTGAACATGGCCAATTCAGTCATAAAACCACAATCTCTTGGTTCCAATTCCTCTGCCACACCTCTATCAATAGGTTCCATTGTTGGATCTACTGACTTAAGGAATTGTTCCAAATCCTCTGGCATGCCTACTCAGTTGACAATTTTCTATGCTGGTTCAGTATGTGTTTATGATGACATATCTCCTGAGAAGGCCAAGGCTATCATGTTAATGGCTGGAAAAGGGTCTACTCCTTCAACTCAGAAAATGGAAGTCTCCACAGCAAAATTGCAGGCAGAAATCTCAATTCCCTCAAAAGATGATGGTTTCATTATAAGGCAAAATTGCAGGCAGCAATCTCTATTCCCACTGACCAACTCTCATATGCATATCAATTCTAGCAACAATGAAATTCCAATAATAAGAGCAGTAGGACCTTCAACTGCCCCTACTAAACATTTGGAGTCACCTATTCTTGTTGGTTCTGTAGGATCTGCATCTAAAGAAAAAAAGGCTCAACCAGTATGCTTGCCTCAGGCACGTAAAGCATCCTTGACTCGGTTTTTGGAGAAGAGAAAGGAAAGGATGATGAGCACATCGCCATATTTTTATATGAGCAAGAAATTATCACCTGAATGCAGCTCTTCTGGATCAGACAGTGTTAGTTTCTCTTTGAACTTCTCTGGATCCTGTTCTCTACCAGCCACCAACTAG 987 0.4124 MQWSFPNKVSAVPQFLSFKTNQEDRPRKTILEPLASSSYMTMSTKDAFDSNQKPFLGLTQRNLSIGKHGAGNKQGIFSVSNQSNQVSPVLQSNLVTTGLNMANSVIKPQSLGSNSSATPLSIGSIVGSTDLRNCSKSSGMPTQLTIFYAGSVCVYDDISPEKAKAIMLMAGKGSTPSTQKMEVSTAKLQAEISIPSKDDGFIIRQNCRQQSLFPLTNSHMHINSSNNEIPIIRAVGPSTAPTKHLESPILVGSVGSASKEKKAQPVCLPQARKASLTRFLEKRKERMMSTSPYFYMSKKLSPECSSSGSDSVSFSLNFSGSCSLPATN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0292 328 ProSiteProfiles Tify domain profile. 137 172 IPR010399 -
Aed7g0292 328 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 224 328 IPR040390 -
Aed7g0292 328 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 224 328 - -
Aed7g0292 328 Pfam tify domain 141 171 IPR010399 -
Aed7g0292 328 SMART tify_2 137 172 IPR010399 -
Aed7g0292 328 Pfam Jas motif 269 293 IPR018467 -
Aed7g0292 328 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 209 IPR040390 -
Aed7g0292 328 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0292 Aed-Chr7 2092382 2095645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0292 1 312 Tify Gene Family AT3G17860 39.481 2.38e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed7g0292 tify 9.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0292 K13464 - gmx:100807288 448.743