Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0281 ATGGAGGAATCAGATTCAACACCAAAGTCTCTGATGGAGAACCTGCTTGGCCTTTTGAGGGTTCGCGTGAAGCGTGGTGTCAACCTTGCCGTTCGTGATGTCCGAAGCAGCGACCCTTATCTTGTCATCAAGATGTACAACCAGAAACTAAAAACTCGTGTGATTAAAAAGGATGTGAATCCTGAGTGGAATGAAGACCTTACTTTTTCTGTTATAAATCCGAATCACCCTGTTAAACTGACTGTGTATGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGAGATCTTTCCCTTTATAGAAGCCTTGAAGATGGACTTAACTGGCCTTTCAAATGGTACTGTAATCCAAAGAATACAACCAAGCCAGCGTAATTTCCTGGCTGATGAGAGCTGCATAACTTATAGCAATGGCAAGGTTGTCCAAGATATGATCCTTAGATTGCGAAATGTTGAATGTGGTGAAGTGGAAATCCAATTGCAGTGGATTGATCTTCCTGGTTCTAAGGGTTTATGA 531 0.4162 MEESDSTPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYLVIKMYNQKLKTRVIKKDVNPEWNEDLTFSVINPNHPVKLTVYDHDTFSKDDKMGDAEFEIFPFIEALKMDLTGLSNGTVIQRIQPSQRNFLADESCITYSNGKVVQDMILRLRNVECGEVEIQLQWIDLPGSKGL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0281 176 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Aed7g0281 176 Gene3D C2 domain 13 174 IPR035892 -
Aed7g0281 176 SMART C2_3c 18 113 IPR000008 -
Aed7g0281 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 175 IPR044562 -
Aed7g0281 176 CDD C2_ArfGAP 16 159 - -
Aed7g0281 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 102 IPR035892 -
Aed7g0281 176 Pfam C2 domain 17 101 IPR000008 -
Aed7g0281 176 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 8 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0281 Aed-Chr7 1990968 1993397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0281 49 176 C2H2 Transcription Factor Family AT1G70790 59.231 1.08e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0281 - - gmx:100810504 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0281 7 1990968 1993397 Aed7g0281 7 1990968 1993397 ECH
Aed5g2652 5 27103211 27104384 Aed7g0281 7 1990968 1993397 PCT