Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0277 ATGGGTGTCTCAGGGAAGTGGATTAAGGCATTGGTGGGTCGAAAGAAATCAGAAAAGACTGAGTTGTTAGAGAAGGATGGAAATAAGGTTGACAAGTTAGGCCATCAGGGAAAGCCTGCTGTCAAGTTTGATAATGGTAATCATCCAAACGAAATTGATAATGATGCTACTCAACCTATTGGAGATGACAATGGCCATACAAACATTGATGCCCATTATTCGCCTTCTACTTCACAACAAGCACATGATCATCAAATGAGTGAGGAATGGGCTGCAATAAGTATTCAAACAGCATATCGAGGATTTCTGGCCAGAAGAGCACTACAAGCTTTGAAAGGAGTGGTAAGGCTTCAGGCCCTTGTAAGAGGCTATGCAGTGAGAAAACAAGCCGCAATAACACTCCGGTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCATGTTCGCATGGCATTGCAAACTCAAGGAACACAACAGAAACTTAAGCAAAAGCTTGCAAACAAAGTTCAAGTTCGAGATATAGAAGAAGGATGGTGTGGTGGCGTAGGATCTGTTGAAGAAATTCAATCCAAAATATTGAAGAGACAGGAGGCTGCAGCAAAACGGGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGACAGCAGCCTGTTTCTTCTGGATTTGAACCGGATAAAAGTAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGCTTTGTTGACATTAATCTGAGGGATGGAGTAACAGTACATGAAAATGGAGCTAAGGGTGATCAAAATGGAACAACACATCAATCAAGACCTGCTAACAAGAAACCACTGTTGTCAAACCCTCATCCGTACCCTACAAGTCAGAGAACTGATCCCATTCTTTCCAATGGCTGTGATTCTTCACCTACACTTGGTAACTCTGCAGGTCTGCTAGAATCATCAGACACACAGCCTATTAAGCCAAATTCTAAGGCAAATGCTGAAAATGCTGTTGAAGAAGCTTATTCAAAACCTGGAATTGAGTCAAGATCTCATTCAAATCCAAAGGAGAGAACATCACAGGCAGATAAGCAGGCCAAAACACGATTATCTCTGCCTAACACTGGGGGTGGCCCTGGATCTCAAACAGCCAAACACCCTATTGGAACCAGTGTAAAAGGGATGCTAAGCACGCAAAAACCTAAACCTAGTAGGGATAACCGTAAGCTCAATAGAGGAAAGGATGTGAAAAATACAAAATCAGTTGCATAG 1293 0.4377 MGVSGKWIKALVGRKKSEKTELLEKDGNKVDKLGHQGKPAVKFDNGNHPNEIDNDATQPIGDDNGHTNIDAHYSPSTSQQAHDHQMSEEWAAISIQTAYRGFLARRALQALKGVVRLQALVRGYAVRKQAAITLRCMQALVRVQARVRARHVRMALQTQGTQQKLKQKLANKVQVRDIEEGWCGGVGSVEEIQSKILKRQEAAAKRERAMAYALAHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINLRDGVTVHENGAKGDQNGTTHQSRPANKKPLLSNPHPYPTSQRTDPILSNGCDSSPTLGNSAGLLESSDTQPIKPNSKANAENAVEEAYSKPGIESRSHSNPKERTSQADKQAKTRLSLPNTGGGPGSQTAKHPIGTSVKGMLSTQKPKPSRDNRKLNRGKDVKNTKSVA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0277 430 SMART iq_5 87 109 IPR000048 GO:0005515
Aed7g0277 430 SMART iq_5 110 131 IPR000048 GO:0005515
Aed7g0277 430 MobiDBLite consensus disorder prediction 41 85 - -
Aed7g0277 430 Pfam IQ calmodulin-binding motif 90 108 IPR000048 GO:0005515
Aed7g0277 430 Pfam IQ calmodulin-binding motif 112 129 IPR000048 GO:0005515
Aed7g0277 430 PANTHER IQ-DOMAIN 5-RELATED 2 390 - -
Aed7g0277 430 MobiDBLite consensus disorder prediction 268 430 - -
Aed7g0277 430 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Aed7g0277 430 MobiDBLite consensus disorder prediction 409 423 - -
Aed7g0277 430 MobiDBLite consensus disorder prediction 272 338 - -
Aed7g0277 430 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Aed7g0277 430 MobiDBLite consensus disorder prediction 357 371 - -
Aed7g0277 430 MobiDBLite consensus disorder prediction 60 85 - -
Aed7g0277 430 Gene3D - 89 130 - -
Aed7g0277 430 PANTHER IQ-DOMAIN 5-RELATED 2 390 - -
Aed7g0277 430 MobiDBLite consensus disorder prediction 372 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0277 Aed-Chr7 1974169 1978362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0277 1 392 IQD Protein Family AT3G22190 53.865 1.60e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0277 - - gmx:100787148 725.702