Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0264 ATGGCAGAACTCGATCTGTCCAAGAAAGTAGCCGATAGGTATCTCAAGCGTGAGGTCCTTGGTGAAGGTACATACGGTGTCGTTTACAAAGCCATTGATACCCAGACAGGTCAGACGGTTGCAATTAAGAAGATCCGGCTTGGCAAGCAGAAAGAAGGGGTCAATTTTACGGCTCTCAGAGAAATTAAACTTCTTAAGGAGATCAAAGATCCAAACATTATTGAGTTGATTGATGCCTTTCCACATAAAGGGAATTTGCATCTTGTGTTTGAGTTCATGGAGACAGACCTCGAAGCTGTTATAAGGGACAGGAATATTGTTCTTTCACCTGGTGATATAAAATCTTACCTTCAGATGACATTAAAAGGCCTTGCTGTTTGCCACAAGAAATGGGTGTTACATAGGGATATGAAGCCAAATAACCTGTTGATAGGATCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCACGGGTATTTGGAAGCCCGGATCGCAAGTTCACTCATCAGGTGTTTGCTCGGTGGTATAGAGCACCTGAGCTATTATTTGGCACCAAGTATTATGGTCCAGGGGTAGATGTTTTTGCTGCAGCTTCATTTGGAACTCCATCTGCTTCGCAGTGGCCTGATATGATTTTCCTTCCTGATTATGTTGAATATCAACATGTTCCTGCCCCACCTTTGCGCTCTTTATTTCCAATGGCAAGTGATGATGCTTTAGATTTGTTGTCAAAGATGTTTACTTATGATCCAAAGGCTAGAATTTCTGTACAGCAGGCATTAGAGCACAGGTACTTCTCATCTGTGCCTCTGCCCACAGATCCTGTTAAACTTCCAAGACCTGCTCCTAAGAAAGAATCTAAGGTTTCAGATATAATTTCAAATGAAGGTCCTACTGTCCTATCACCTCCAAGAAAGTCTAGGAGAGTAATGCCAGGGTGTGATGGGTCTGAAGGGAATTCTTTGCAAGGAGATAAGTTTGATGACAGTGTTAGTGTCAGACAGGCAGCTGGTGATAATACGGGCAAGAATGAGCCAGCTCCAATGTCACTAGATTTTTCTCTTTTTGGATTAAAACCTCCTAATAGACCTACAATTACCAGTGCTGACAGATCACATTTAAAAAGAAAATTAGATCTAGAATTCTAG 1152 0.4175 MAELDLSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEIKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPGDIKSYLQMTLKGLAVCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARVFGSPDRKFTHQVFARWYRAPELLFGTKYYGPGVDVFAAASFGTPSASQWPDMIFLPDYVEYQHVPAPPLRSLFPMASDDALDLLSKMFTYDPKARISVQQALEHRYFSSVPLPTDPVKLPRPAPKKESKVSDIISNEGPTVLSPPRKSRRVMPGCDGSEGNSLQGDKFDDSVSVRQAAGDNTGKNEPAPMSLDFSLFGLKPPNRPTITSADRSHLKRKLDLEF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0264 383 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0264 383 MobiDBLite consensus disorder prediction 360 383 - -
Aed7g0264 383 Gene3D Transferase(Phosphotransferase) domain 1 200 283 - -
Aed7g0264 383 Gene3D Transferase(Phosphotransferase) domain 1 95 199 - -
Aed7g0264 383 ProSiteProfiles Protein kinase domain profile. 14 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0264 383 MobiDBLite consensus disorder prediction 273 329 - -
Aed7g0264 383 CDD STKc_CDK7 13 280 IPR037770 GO:0005675|GO:0008353|GO:0070985
Aed7g0264 383 PANTHER CYCLIN-DEPENDENT KINASE D-2 200 330 - -
Aed7g0264 383 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 199 - -
Aed7g0264 383 SMART serkin_6 14 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0264 383 PANTHER CELL DIVISION PROTEIN KINASE 200 330 - -
Aed7g0264 383 PANTHER CELL DIVISION PROTEIN KINASE 9 199 - -
Aed7g0264 383 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Aed7g0264 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Aed7g0264 383 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Aed7g0264 383 SUPERFAMILY Protein kinase-like (PK-like) 9 275 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0264 Aed-Chr7 1862839 1869260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0264 8 383 Core Cell Cycle Gene Families AT1G73690 70.545 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Aed7g0264 Pkinase 2.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0264 K02202 - gmx:100814263 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0264 7 1862839 1869260 Aed7g0264 7 1862839 1869260 ECH
Aed5g2626 5 26934458 26938601 Aed7g0264 7 1862839 1869260 PCT