Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0263 GACCAATGGAGATTGGTACAAAAGGTCACATACTCACAAGTCACAACTTCAATCCCGCTTTCTACAGGCACATACGAAGAATTGGACGAGTTCTTCTATTGCTTCGATATTTACATTTCAAAGCACCATCTGAAAACAACCTTTACTTCAATCAGTTCCGTAATTGAATCTTTAACTGGCAGGATATTTACTCATGCCCATCTAGCGCAGTTGAAGTTCATCTTGCCTGAGGCTATTGTTCTCAAGAAGCATCTAGTGCTTGATGAATGGACGAGATGTATGAGGTCGGATATTTGCATTTCTCTGGACCCTGCGGCGGTGGAGGCTGATGCGAATTTGGCCCCTGAACGAGGGATAGTGTCACGGAAGGATGTGTTCCGGGAACGGCTAAGGGAGTTTTCGGAATCTCATCCTGAGGGAATTTCTTTTGTTGCTAGGGTTAAGTCCTTGAGACGTGAAGGTGAATTGCCTGAGCCATTCAATCGCCAAAAGAAAGAAAGTATTTCGGAATCTTGTCCCCCGACAAGATTGTCACTCATGCGCTATAGTGACATCGAGGGGTCTTCTGGTGCTCCCCCTGCTACTCCAAGCAAAACCATTGACAACGCAGAAAACAAAGAGGGGTCTTTCAAGAGCATTAATGCCATGTCAACACCAGCAAGAAAAACAATTGAGTACACAGAAAACAGAAATGGGTCTCTCGAGAGCATAGATGCCACGTCAACTCCGGCTAAACTTGTTTCTACTCCAATTAGGTTGATGAGTGCCACACCTGCCTTGCGTTCACCCAAAAGACCTTATATGAGCCCAGATGACAACTCTACCAGTTCTTTGAGCAAATTAGCTAGGCGTCCACCTTGCTCAAGGTCATTGAAATTTGACACTCCAGTGAAGAATAAGGAGTCTCTGGATAGACTTATTACTGACAACCTCCAAGAAAATCTTATACAATCGATTAGAGAAAAGGAAAGAATGACAATGGAGGAAAGAGACCCAGCTATCACACAAGAAGAGAAACGAAAGAAAAATATAGCTAGCCTCCCTAAGCGCTTTGACATGATTTGCCGCTTGCTTCAACAACGAATGCTTATAAGCAAGATAATCTCAAGCTGCTCTGATATTCTTGACAGAAGTGAAGTTGAAGAACAGATTAGTTTGTTGCAGGAACTAGCACCGGAATGGATTTCTGAGGAAAGCAGATTCCTAGTGGGGATTTCCTATTATTCAAAAATAAAATGTCGAGCCCTGAAGCCATTCAAGCATCTCTTGAAGAAGCAACACGGTGAGTAA 1290 0.4341 DQWRLVQKVTYSQVTTSIPLSTGTYEELDEFFYCFDIYISKHHLKTTFTSISSVIESLTGRIFTHAHLAQLKFILPEAIVLKKHLVLDEWTRCMRSDICISLDPAAVEADANLAPERGIVSRKDVFRERLREFSESHPEGISFVARVKSLRREGELPEPFNRQKKESISESCPPTRLSLMRYSDIEGSSGAPPATPSKTIDNAENKEGSFKSINAMSTPARKTIEYTENRNGSLESIDATSTPAKLVSTPIRLMSATPALRSPKRPYMSPDDNSTSSLSKLARRPPCSRSLKFDTPVKNKESLDRLITDNLQENLIQSIREKERMTMEERDPAITQEEKRKKNIASLPKRFDMICRLLQQRMLISKIISSCSDILDRSEVEEQISLLQELAPEWISEESRFLVGISYYSKIKCRALKPFKHLLKKQHGE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0263 429 SMART CDT1_2 20 158 IPR014939 -
Aed7g0263 429 SUPERFAMILY "Winged helix" DNA-binding domain 24 140 IPR036390 -
Aed7g0263 429 Pfam DNA replication factor CDT1 like 24 133 IPR014939 -
Aed7g0263 429 Pfam DNA replication factor Cdt1 C-terminal domain 314 398 IPR032054 -
Aed7g0263 429 PANTHER DNA REPLICATION FACTOR CDT1 24 398 IPR045173 GO:0003677|GO:0030174|GO:0071163
Aed7g0263 429 MobiDBLite consensus disorder prediction 190 216 - -
Aed7g0263 429 MobiDBLite consensus disorder prediction 184 216 - -
Aed7g0263 429 MobiDBLite consensus disorder prediction 268 283 - -
Aed7g0263 429 Gene3D - 305 403 IPR038090 -
Aed7g0263 429 MobiDBLite consensus disorder prediction 256 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0263 Aed-Chr7 1852786 1857037 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0263 25 398 Core DNA Replication Machinery Family AT2G31270 33.257 1.30e-49 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0263 K10727 - gmx:100808801 292.737