Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0248 ATGCATGTAACAAGCACGTTGAAAATGTTAGGGCATCAGATGAAAGGGCGAGTGAGTTTTCTTGTAAATTCTATGCAGGTAGAAGTTTTTATGCTCATCGAGATTGTTTACTTTCTTCAGATGTATTTCAGGCAATGTTTCATGGCGGTTATAGGATTTATATACACTGGAACAGCAGATGTCAATTTGGACATTGCTCAGGACCTCCTCAGAGCTGCAGATCAGTTTCTTCTGGACAACCTTAAGCGTATTTGTGAATATGCTATTGCTCTGGATATTTCTGAGGAAAATGTTTTACTAACGTACGAGATGTCGGAGGCTTACAATGCTACTACATTAAAACATGAATGTCTACTGTTTGTGCTAAAGAGATTTGATAAACTGAGGTTGAAACCATGGTATGCTACACTTTTTACAACCATGAAATCCATAGTTTACCGTGTTTATCATATCTTATGTTCTCCATGTTTTTAA 474 0.3692 MHVTSTLKMLGHQMKGRVSFLVNSMQVEVFMLIEIVYFLQMYFRQCFMAVIGFIYTGTADVNLDIAQDLLRAADQFLLDNLKRICEYAIALDISEENVLLTYEMSEAYNATTLKHECLLFVLKRFDKLRLKPWYATLFTTMKSIVYRVYHILCSPCF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0248 157 Pfam BTB/POZ domain 47 89 IPR000210 GO:0005515
Aed7g0248 157 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 46 142 IPR044282 -
Aed7g0248 157 Gene3D Potassium Channel Kv1.1; Chain A 9 129 IPR011333 -
Aed7g0248 157 SUPERFAMILY POZ domain 39 89 IPR011333 -
Aed7g0248 157 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 46 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0248 Aed-Chr7 1738697 1740502 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed7g0248 BTB 9.6e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0248 - - gmx:100783124 138.658