Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0232 ATGTCAGAACAAAGATATACATCAAAACTACCAAAACATGAGAATACTAAAGAAATTTGCTATTCTGATAAGCCACCTGCAACGTTTGGAAATTACATCATGAGATTGAGGTGTGATTTCTTTGTGTGCTTCTTCACTAGCACATCTTCAGACACAATTCCATTGGCAAAGGACAGTAAGTTGCAGTGGCGAATCTTTCCCTACAAGGAACTTGCAAAAGCCACAAATAATTTTGATCGATTTCATTACCTTGGAGAGAGAGGTGGAAAGAGTGACTTTATCAGTCAATATTACGGGAAACTTGAGGATGAACGTGAGATTACAGTGCAGCGCTTTAATGGAGACCAACGCTACACATTGCAACAGTTTACCAATGAAACTGATATCCTAAATTTCTTGCCTCACAAGAATATTGTGTCAATCTACGGCTGTGCTTCTCATCACAAGGAATGTCTGCTGGTAGTTGAATACCTATCCAAAGGCAATCTAGCTGCTAATCTTCAAAGTGAAAAGGACGAAAACATCACTCTACCTTGGCTTAAACGAAAAATTGAAAACCAAGCTTTGGTGGACCTGTTGGATCCAAACCTTGGCTTCGAATCAAACCTTGAGATCAAACAGGTGATGACTGCTACAGCTGAGCTTGCACTTAGGTGCATGAAATGTCCGCAAGAATTAAGGCCAAACATGGAACAGATCTCAGCTTTGAAAATCTTCAACCCTGCTGAACTTGAAGAAGCTACTAACAAATTTGACACTTGCCTTGGAAAGGGAGGGTATGGAAGCGTGTACTATGGAAAACTTAAAGATGGGCGAAAGGTTGCAATAAAATGTTTCCATGGCGAGAACGAGACAGAAGAGACCATTAAGCGATTCATGAAAGAAACTGATACCTTAGGTCTCTTGCATCATAAGAATCTGGTTTCACTTTATGGCCGCACTTCTCGCCATAGCAACAGACACATGCTAGTAGTGGATCCAAGTTTTTGGTTTGGTTCTGACAAAAAGATTGTGGAAATGACAAAAGCAGTGGCAGATTTAGCATTTCGGTGTGTGCGGTCTCCAAAGGATTTCAGACCATCCATGAAAGAGGTGCTTGAGACACTGGAGGCCATAAGGAAAGGAACATCTTGA 1134 0.4101 MSEQRYTSKLPKHENTKEICYSDKPPATFGNYIMRLRCDFFVCFFTSTSSDTIPLAKDSKLQWRIFPYKELAKATNNFDRFHYLGERGGKSDFISQYYGKLEDEREITVQRFNGDQRYTLQQFTNETDILNFLPHKNIVSIYGCASHHKECLLVVEYLSKGNLAANLQSEKDENITLPWLKRKIENQALVDLLDPNLGFESNLEIKQVMTATAELALRCMKCPQELRPNMEQISALKIFNPAELEEATNKFDTCLGKGGYGSVYYGKLKDGRKVAIKCFHGENETEETIKRFMKETDTLGLLHHKNLVSLYGRTSRHSNRHMLVVDPSFWFGSDKKIVEMTKAVADLAFRCVRSPKDFRPSMKEVLETLEAIRKGTS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0232 377 Gene3D Phosphorylase Kinase; domain 1 222 326 - -
Aed7g0232 377 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 182 325 IPR044652 -
Aed7g0232 377 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 59 182 IPR044652 -
Aed7g0232 377 SUPERFAMILY Protein kinase-like (PK-like) 232 325 IPR011009 -
Aed7g0232 377 Pfam Protein kinase domain 253 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0232 377 PANTHER TYROSINE KINASE FAMILY PROTEIN 323 376 - -
Aed7g0232 377 ProSiteProfiles Protein kinase domain profile. 249 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0232 377 ProSitePatterns Protein kinases ATP-binding region signature. 255 277 IPR017441 GO:0005524
Aed7g0232 377 PANTHER TYROSINE KINASE FAMILY PROTEIN 182 325 - -
Aed7g0232 377 PANTHER TYROSINE KINASE FAMILY PROTEIN 59 182 - -
Aed7g0232 377 Gene3D Phosphorylase Kinase; domain 1 54 157 - -
Aed7g0232 377 Pfam Protein tyrosine and serine/threonine kinase 103 180 IPR001245 GO:0004672|GO:0006468
Aed7g0232 377 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 323 376 IPR044652 -
Aed7g0232 377 SUPERFAMILY Protein kinase-like (PK-like) 64 182 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0232 Aed-Chr7 1656620 1660160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0232 236 324 Receptor kinase-like Gene Family AT1G25390 50.549 1.64e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed7g0232 Pkinase 4.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0232 - - gmx:100776297 246.899