Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0231 ATGGGGTGTGATCTCTTTGATTGCTGCTTCACTAGCACTTCTTCATACACATTTTCAAAGCAGAGTAAGTGGCGAATCTTGCCATACAAGAAACTTGCAAAGGTCACAAATAATTTTGATCAATCTCATTGTCTTGGAAAGAGAGGATTTGCCACTGAATATTATGGAAAACTTGAGGATGGGCGTGAGATAACAATCCAGTGCTTTAACGAAGACAAGCACCACATGTTGCAACAGTTTATCAATGAAACTGCAATCCTAAACTACTTGCCTCACAAAAACATTGTGTCAATTTATGGCTGTGCTTCTCATCACGAGGAATCACTGCTAGTGCATGAATACCTATCCAATGGCAACCTTGCTGCTCATCTTCAAACTTTAGTGGAGCTGTTGGATCCAAGACTTGGCTTCCAAACAAATCTTAAGATCAAGCGGATGATGACTGCTACGGCTGAGCTTGCACTTCTATGCATGAGATGTCCACAAGAATTAAGGCCAAATATGGAACAGGTGCTAGAGACACTCAATGGCATAAAGCAAGGAAGATATGAAACAAACTCAACAAAAGAAACTGAGATCTTAATTCTGTTGCACCATCAAAATCTGGTTTCACTCTATGGCCGCACTTCTCGCCATAGCAACAAACACATGATAGTGTATGAGTACATCTCCAATGGCACTCTTTCTAAACATCTTCATCATGAATCTTCCCGTGCACAGTTTGCAAAGAGAAAAATCTTAAACAAGGAATTAAACGCGGTGGTGGACCCAAGTTTTTGGTTTGGTGTTGACAAAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTTAGACCAACCATGAAACAGGTGCTAGATACTCTTGAGGGCATAAGGAAAGGAACATGGGGATTCAATCAGATAACATAG 942 0.4087 MGCDLFDCCFTSTSSYTFSKQSKWRILPYKKLAKVTNNFDQSHCLGKRGFATEYYGKLEDGREITIQCFNEDKHHMLQQFINETAILNYLPHKNIVSIYGCASHHEESLLVHEYLSNGNLAAHLQTLVELLDPRLGFQTNLKIKRMMTATAELALLCMRCPQELRPNMEQVLETLNGIKQGRYETNSTKETEILILLHHQNLVSLYGRTSRHSNKHMIVYEYISNGTLSKHLHHESSRAQFAKRKILNKELNAVVDPSFWFGVDKNMMEMITAVAELAFQCVQCPKELRPTMKQVLDTLEGIRKGTWGFNQIT 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0231 313 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 237 313 IPR044652 -
Aed7g0231 313 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 189 236 IPR044652 -
Aed7g0231 313 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 126 IPR044652 -
Aed7g0231 313 Gene3D Phosphorylase Kinase; domain 1 171 221 - -
Aed7g0231 313 PANTHER TYROSINE KINASE FAMILY PROTEIN 237 313 - -
Aed7g0231 313 PANTHER TYROSINE KINASE FAMILY PROTEIN 189 236 - -
Aed7g0231 313 PANTHER TYROSINE KINASE FAMILY PROTEIN 21 126 - -
Aed7g0231 313 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 125 189 IPR044652 -
Aed7g0231 313 Pfam Protein tyrosine and serine/threonine kinase 179 239 IPR001245 GO:0004672|GO:0006468
Aed7g0231 313 Pfam Protein tyrosine and serine/threonine kinase 45 137 IPR001245 GO:0004672|GO:0006468
Aed7g0231 313 ProSiteProfiles Protein kinase domain profile. 39 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0231 313 SUPERFAMILY Protein kinase-like (PK-like) 187 239 IPR011009 -
Aed7g0231 313 PANTHER TYROSINE KINASE FAMILY PROTEIN 125 189 - -
Aed7g0231 313 Gene3D Phosphorylase Kinase; domain 1 11 114 - -
Aed7g0231 313 Gene3D Transferase(Phosphotransferase) domain 1 222 308 - -
Aed7g0231 313 SUPERFAMILY Protein kinase-like (PK-like) 13 128 IPR011009 -
Aed7g0231 313 SMART tyrkin_6 39 299 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0231 Aed-Chr7 1653224 1655524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0231 23 303 Receptor kinase-like Gene Family AT1G25390 30.976 6.24e-33 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed7g0231 PK_Tyr_Ser-Thr 1.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0231 - - vun:114181918 260.766