Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0228 ATGGATTGCCGTAGTGGGTTGGTAGTGAGCATGTGTTGGGTAATAATGTTTTTAACTAGTTTGCCACAATCCCAGTGTGATTCGGATTGTAAGGAATACAACTGCGGAACACTGTCCAGGATTTCCGGTCCTTTCTGGGGAGAGAAGCGAGAGGCTGCATGTGGTGGCAGTCATCCGTTGGAACTCACTTGCAACGATGATGGTGATACTACAATTCGAATTGGCTCACAAAATTTCACAGTGAAGCGTATCGACATGAAAGCCAAAACCATGACACTGGTGCGAACAGACCTTCTCCGCGATGTTTGTTATCCTAAATATGAGGACACTTATGTGAACCCATCTCGGTTCGGGTATCCCCCGTACAACATCACCATATTCTACCATTGTTCAGATATTAGATGCGGGTATGCTTACCCTTCCGAGGAGGACCCTGAGAATCTGTTCAAGTATTTACCAGACCTTCGGAGTTGCACAGAACGCGTGCGCGTGCCGGCTAACGAGTCCCTGCATAATTATTATTATGGTCCTCCTGGAGAAAATCATTATGATTTGATTAAAGTTCTGGACGGGTTTGAGGTCACCTACAATCTCCACAAGGTGGTGGGAGTACTTGTAGGCATTGGCATCTATTTCTTGGTGCGCCGAAGGAAGAGCCGTCTTGCAATGTCATATATACAATCTCGGAGCCTCTCTTCTGATCCATCTTCAAAAGACACTGAGAAGGGAATTCGAAGCTTTACTCAAAGCTTTGCACATGGAGTGCCCCTCTTCTCCTATGACGAACTTGAAGAGGCCACAAATTACTTTGACTCATCAAAAGAACTAGGAGAAGGTGGCTTTGGGACAGTGTATTTTGGAAAACTGCGGGATGGACGTTCTGTTGCAGTGAAGAGGTTGTACGAGAACAACTACAAGAGAGTTGAACAGTTCATGAATGAAATCAAAATCCTAGCAAAGTTAGTTCATCCAAATCTTGTAACATTATATGGATGCACCTCTCGCCACAGCCGAGAGCTTCTGCTTGTATACGAGTACATTCCTAATGGAACAGCACTGCATGAGCTTGTGGACCCTACCCTCGGGTTTGAATCGGATTTCAAAGTCAAGAAAATGATAAATGCTGTGGCTGAGTTAGCATTTCAGTGCCTGCAAAGTTCGAAAGAGATGAGGCCTTCTATGGAAGAAGTGGAGGAGACTCTCAAGGATATACAGAGTGATGGAAAACATAATAAAAGCCAGCCTGAGGTAATGGATATAACAAGCACAGCTGATGATGTTGTGTTGCTGAAGGATGATCCTCCTCCACCATCACCTGATTCTAATGCTGTGAGCAAGTCAACAACACCAAATGCTAGCGGATAA 1365 0.4484 MDCRSGLVVSMCWVIMFLTSLPQSQCDSDCKEYNCGTLSRISGPFWGEKREAACGGSHPLELTCNDDGDTTIRIGSQNFTVKRIDMKAKTMTLVRTDLLRDVCYPKYEDTYVNPSRFGYPPYNITIFYHCSDIRCGYAYPSEEDPENLFKYLPDLRSCTERVRVPANESLHNYYYGPPGENHYDLIKVLDGFEVTYNLHKVVGVLVGIGIYFLVRRRKSRLAMSYIQSRSLSSDPSSKDTEKGIRSFTQSFAHGVPLFSYDELEEATNYFDSSKELGEGGFGTVYFGKLRDGRSVAVKRLYENNYKRVEQFMNEIKILAKLVHPNLVTLYGCTSRHSRELLLVYEYIPNGTALHELVDPTLGFESDFKVKKMINAVAELAFQCLQSSKEMRPSMEEVEETLKDIQSDGKHNKSQPEVMDITSTADDVVLLKDDPPPPSPDSNAVSKSTTPNASG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0228 454 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247
Aed7g0228 454 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 21 134 - -
Aed7g0228 454 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 352 444 IPR044652 -
Aed7g0228 454 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 201 352 IPR044652 -
Aed7g0228 454 Gene3D Phosphorylase Kinase; domain 1 243 346 - -
Aed7g0228 454 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 352 444 - -
Aed7g0228 454 Pfam Protein kinase domain 271 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0228 454 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Aed7g0228 454 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 134 IPR044652 -
Aed7g0228 454 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 201 352 - -
Aed7g0228 454 ProSiteProfiles Protein kinase domain profile. 270 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0228 454 SUPERFAMILY Protein kinase-like (PK-like) 250 360 IPR011009 -
Aed7g0228 454 MobiDBLite consensus disorder prediction 402 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0228 Aed-Chr7 1637662 1643948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0228 352 454 Receptor kinase-like Gene Family AT1G25390 41.964 9.11e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed7g0228 Pkinase 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0228 - - gmx:100800873 243.817