Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed7g0228 | ATGGATTGCCGTAGTGGGTTGGTAGTGAGCATGTGTTGGGTAATAATGTTTTTAACTAGTTTGCCACAATCCCAGTGTGATTCGGATTGTAAGGAATACAACTGCGGAACACTGTCCAGGATTTCCGGTCCTTTCTGGGGAGAGAAGCGAGAGGCTGCATGTGGTGGCAGTCATCCGTTGGAACTCACTTGCAACGATGATGGTGATACTACAATTCGAATTGGCTCACAAAATTTCACAGTGAAGCGTATCGACATGAAAGCCAAAACCATGACACTGGTGCGAACAGACCTTCTCCGCGATGTTTGTTATCCTAAATATGAGGACACTTATGTGAACCCATCTCGGTTCGGGTATCCCCCGTACAACATCACCATATTCTACCATTGTTCAGATATTAGATGCGGGTATGCTTACCCTTCCGAGGAGGACCCTGAGAATCTGTTCAAGTATTTACCAGACCTTCGGAGTTGCACAGAACGCGTGCGCGTGCCGGCTAACGAGTCCCTGCATAATTATTATTATGGTCCTCCTGGAGAAAATCATTATGATTTGATTAAAGTTCTGGACGGGTTTGAGGTCACCTACAATCTCCACAAGGTGGTGGGAGTACTTGTAGGCATTGGCATCTATTTCTTGGTGCGCCGAAGGAAGAGCCGTCTTGCAATGTCATATATACAATCTCGGAGCCTCTCTTCTGATCCATCTTCAAAAGACACTGAGAAGGGAATTCGAAGCTTTACTCAAAGCTTTGCACATGGAGTGCCCCTCTTCTCCTATGACGAACTTGAAGAGGCCACAAATTACTTTGACTCATCAAAAGAACTAGGAGAAGGTGGCTTTGGGACAGTGTATTTTGGAAAACTGCGGGATGGACGTTCTGTTGCAGTGAAGAGGTTGTACGAGAACAACTACAAGAGAGTTGAACAGTTCATGAATGAAATCAAAATCCTAGCAAAGTTAGTTCATCCAAATCTTGTAACATTATATGGATGCACCTCTCGCCACAGCCGAGAGCTTCTGCTTGTATACGAGTACATTCCTAATGGAACAGCACTGCATGAGCTTGTGGACCCTACCCTCGGGTTTGAATCGGATTTCAAAGTCAAGAAAATGATAAATGCTGTGGCTGAGTTAGCATTTCAGTGCCTGCAAAGTTCGAAAGAGATGAGGCCTTCTATGGAAGAAGTGGAGGAGACTCTCAAGGATATACAGAGTGATGGAAAACATAATAAAAGCCAGCCTGAGGTAATGGATATAACAAGCACAGCTGATGATGTTGTGTTGCTGAAGGATGATCCTCCTCCACCATCACCTGATTCTAATGCTGTGAGCAAGTCAACAACACCAAATGCTAGCGGATAA | 1365 | 0.4484 | MDCRSGLVVSMCWVIMFLTSLPQSQCDSDCKEYNCGTLSRISGPFWGEKREAACGGSHPLELTCNDDGDTTIRIGSQNFTVKRIDMKAKTMTLVRTDLLRDVCYPKYEDTYVNPSRFGYPPYNITIFYHCSDIRCGYAYPSEEDPENLFKYLPDLRSCTERVRVPANESLHNYYYGPPGENHYDLIKVLDGFEVTYNLHKVVGVLVGIGIYFLVRRRKSRLAMSYIQSRSLSSDPSSKDTEKGIRSFTQSFAHGVPLFSYDELEEATNYFDSSKELGEGGFGTVYFGKLRDGRSVAVKRLYENNYKRVEQFMNEIKILAKLVHPNLVTLYGCTSRHSRELLLVYEYIPNGTALHELVDPTLGFESDFKVKKMINAVAELAFQCLQSSKEMRPSMEEVEETLKDIQSDGKHNKSQPEVMDITSTADDVVLLKDDPPPPSPDSNAVSKSTTPNASG | 454 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed7g0228 | 454 | Pfam | Wall-associated receptor kinase galacturonan-binding | 30 | 95 | IPR025287 | GO:0030247 | |
Aed7g0228 | 454 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 | 21 | 134 | - | - | |
Aed7g0228 | 454 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 352 | 444 | IPR044652 | - | |
Aed7g0228 | 454 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 201 | 352 | IPR044652 | - | |
Aed7g0228 | 454 | Gene3D | Phosphorylase Kinase; domain 1 | 243 | 346 | - | - | |
Aed7g0228 | 454 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 | 352 | 444 | - | - | |
Aed7g0228 | 454 | Pfam | Protein kinase domain | 271 | 376 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed7g0228 | 454 | ProSitePatterns | Protein kinases ATP-binding region signature. | 276 | 298 | IPR017441 | GO:0005524 | |
Aed7g0228 | 454 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 21 | 134 | IPR044652 | - | |
Aed7g0228 | 454 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 | 201 | 352 | - | - | |
Aed7g0228 | 454 | ProSiteProfiles | Protein kinase domain profile. | 270 | 454 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed7g0228 | 454 | SUPERFAMILY | Protein kinase-like (PK-like) | 250 | 360 | IPR011009 | - | |
Aed7g0228 | 454 | MobiDBLite | consensus disorder prediction | 402 | 454 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed7g0228 | Aed-Chr7 | 1637662 | 1643948 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed7g0228 | 352 | 454 | Receptor kinase-like Gene Family | AT1G25390 | 41.964 | 9.11e-15 | 74.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Aed7g0228 | Pkinase | 1.2e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed7g0228 | - | - | gmx:100800873 | 243.817 |