Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0221 ATGGCGACGCCGCTGACGGGGCTGAATGGCGGCGGCGGGGTGGCGGTGCTGACAAATCCGGTGAGCAAGGTGGATTCCTCCGCCAATGGCGGCGGCGGCTTCGGCCGGTCGCTGTCGGAATCGCCAATTCTGATATTCTCGTTCTTCCACAAGGCGATTCGGAACGAGCTCGATGGGCTGCACCAATTGGCGATGGCCTTCGCCACCGGAAACTGCTCCGACATCCAGCCCCTCTTCCAACGCTACTATTTCCTCAGATCGATGTACAGACATCACTCCAATGCCGAAGATGAGGTGATTTTTCCAGCTCTAGATATACGTGTGAAAAATGTAGCACAGACATATTCCCTTGAACACCAGGGTGAAAGTGATCTTTTTGATCATCTATTTGAGCTGTTAAACTCTTGCACCCATGATGTCGAAAGTTTCCCAAAGGAGTTAGCATCCTGCACAGGAGCTCTGCAGACATCGGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCACTGCTTCTTGAGAAGTTCTCTCTTGAGGAACAGGCATCTCTAGTTTGGCAGTTTCTCTGCAGTATTCCTGTAAATATGATGACAGAATTTCTTCCATGGCTTTCAACATCTATATCACCTGATGAATCTCAGGATTTGCGGAAGTGCTTAAGCAAGATAGTGCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACCTGGATGGAAGGGAGAAGTAGTGCTAGCACAGTTGAAAATTGTGTAGATCATTCTCAGGTGCGATGTAGTCCTAATCTTTTAACCCATCAGAATGGGAAAATAAAATGTGCATGCGAGTCCACAGCTACTGGAAAAAGGAAATATTCTGGATTTATCACAGATGTTACTGATACCATGAGAACACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAAAGAGAGTTAAATGAGATTGCTGCACTGACTAGAAAGATACAACTCTCTGGAGATTTTACTAACCTGTCAGCTTTCAATGAAAGGTTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGAGAAGGTTATTTTTCCAGCAGTAGATGGAAAGTTTTCTTTCTTTCAAGAACATGCTGAAGAAGAAAGCCAATTTAATGAGTTCCGGTCTTTGATTGAAAGCATTCAAAGTGAAGGAGCAACATCTAGTTCAGAAACTGAATTTTACTCAACATTGTGTTCACATGCTGATCATATATTGGAAATGATACAGATACATTTCTTTAATGAAGAAGTTCAGGTTCTTCCTCTTGCACGGAAGCACTTTAGCTTCAAAAGGCAACGTGAACTTCTCTATCAAAGCTTATGCATGATGCCTTTGAAATTGATTGAGCGTGTCCTCCCATGGTTGATTGGATCATTAACTGAAGATGAAGCACAAATATTTTTGAAAAACATGCAATTGGCAGCTCCAGCAATAGATTCTGCTTTAGTCACACTTTTCTGTGGTTGGGCTTGCAAGGCTCGTAAGGATGGTCTGTGTTTGTCTTCAAGTGTGTCAGGTTGCTGTCCGGCCCAGAGATTTACTGATATTGAAGAAAATACTGTTCAATCTTCCTGTACTTCTGCTTCTGCACTGTCTGGTAGAGATTGCTCAGTATTAGCTGAATCAGATGGGACCCAACAAAGATCTGTCAAGCGAAACATATCGGAGGTGCACAAGAATGAAGATGTCTCTAAAACTTCAGAAAGTGAAAGTATTCAGAAACAATGTTGTAGTGCCCAGTCTTGTTGTGTGCCAGCTTTAGGAGTCAGCAGGAACAATTTGGGGCTGGGTTCACTCTCTACAACCAAGTCCTTACGCTCTTTGTCTTTCACAGCTTCTGCCCCATCTCTTAATTCTAGTCTTTTCATATGGGAAACAGACAACAGTTCATGTGATGTTGGCTCTACAGAAAGACCAATTGATACCATATTTAAATTCCATATAGCCATACGCAAAGACTTGGAGTATTTAGACATTGAATCTGGAAAGCTTTGTGATGGTGATGAAACAATTATTCGGCAATTTAGTGGAAGATTCCGGCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCTGCCCTCGAATCCAAAGAGGCACTTCATAATGTGAGTCATTCTTACACACTGGATCATAAGCAGGAAGAAAAATTATTTGAAGATATTTCATGTGTTCTTTCTGAGCTTTCTGTCCTTCATGAAGATTTGCAAAGGACCCATATGTCAGTGGATTTAAGTGAAAATAGTTTTGGAAATTCTGATGCCAATGATAGTGATAATATCAAAAAGTACAATGAGCTTGCAACTAAGCTTCAAGGGATGTGCAAATCTATTAGAGTGACCCTGGATCAACATATTTTTAGGGAAGAGCTCGAGCTCTGGCCATTGTTTGGAAAACATTTCACTGTGGAAGAGCAAGACAAGATAGTGGGCCGTATAATTGGAACTACAGGTGCTGAAGTTCTCCAATCAATGTTACCATGGGTAACTTCTGCACTTACACAGGATGAACAGAACAAAATGATGGACACATGGAAACAGGCAACTAAAAACACCATGTTCAATGAATGGCTAAATGAATGCTTGAAAGAAAGTCCCGTATCTACATCACAGACAGAAGCATCAGAGCGTAGCACTTCTCAAAGAGGTGGTGATTGTCAAGAAAGCTTGAACCTGAATGAGCAGATGTTCAAGCCAGGATGGAAAGACATATTCCGTATGAATCAGAATGAACTTGAGTCAGAAATCAGGAAGGTTTATCGTGACTCAACTCTTGATCCAAGGAGAAAGGCATACCTTGTGCAGAATCTAATGACAAGTCGTTGGATAGCTGCCCAACAGAAGTTACCTAAGACACCATCTGGGGAATCTAGTAAACAAATAGAAGGATGCTCACCAGCATTTCGAGACTCAGAGAAACAAATATTTGGTTGTGAGCACTATAAGCGAAATTGCAAGCTTCGAGCTGCTTGTTGTGGCAAGTTATTTACTTGCAGATTTTGTCATGACAATGCAAGTGATCACTCAATGGATAGAAAAGCAACATTGGAAATGATGTGTATGCAGTGCCTAACTATACAGCCAGTTGGGCCTATATGCATTTCACCTTCATGTAATGGACTTACAATGGCAAAGTATTATTGCAACATTTGCAAATTTTTTGATGATGAAAGGAATGTTTATCATTGCCCATTTTGCAATATATGTCGTGTTGGACAAGGGCTTGGGATTGATTATTTTCATTGTATGAAATGCAATTGTTGCCTGGGGATAAAATCAACATCTCACAAGTGCCTGGAGAAAGGTTTAGAAATGAACTGCCCAATATGCTGTGACGACTTGTTCACATCAAGTGCAACAGTGAGAGCTTTACCTTGTGGGCATTACATGCACTCATCTTGCTTTCAGGCGTACACTTGTAGCCACTACACATGTCCAATCTGCAGCAAATCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCGTTATTGGCTGCTGAGCAGCTTCCTGAAGAGTACAGGGACCGCTATCAGGATATACTCTGCCATGACTGTGATAGAAAGGGTACTTCACGCTTCCACTGGTTATATCACAAATGTGGATCTTGTGGCTCATACAATACCCGGGTAATCAAGAGCGAGGCAACAAATTCTAGCTGCCTTTAG 3720 0.4167 MATPLTGLNGGGGVAVLTNPVSKVDSSANGGGGFGRSLSESPILIFSFFHKAIRNELDGLHQLAMAFATGNCSDIQPLFQRYYFLRSMYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHQGESDLFDHLFELLNSCTHDVESFPKELASCTGALQTSVSQHMAKEEEQVFPLLLEKFSLEEQASLVWQFLCSIPVNMMTEFLPWLSTSISPDESQDLRKCLSKIVPEEKLLQKVIFTWMEGRSSASTVENCVDHSQVRCSPNLLTHQNGKIKCACESTATGKRKYSGFITDVTDTMRTHPIDEILLWHNAIKRELNEIAALTRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEEKVIFPAVDGKFSFFQEHAEEESQFNEFRSLIESIQSEGATSSSETEFYSTLCSHADHILEMIQIHFFNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLIGSLTEDEAQIFLKNMQLAAPAIDSALVTLFCGWACKARKDGLCLSSSVSGCCPAQRFTDIEENTVQSSCTSASALSGRDCSVLAESDGTQQRSVKRNISEVHKNEDVSKTSESESIQKQCCSAQSCCVPALGVSRNNLGLGSLSTTKSLRSLSFTASAPSLNSSLFIWETDNSSCDVGSTERPIDTIFKFHIAIRKDLEYLDIESGKLCDGDETIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEEKLFEDISCVLSELSVLHEDLQRTHMSVDLSENSFGNSDANDSDNIKKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECLKESPVSTSQTEASERSTSQRGGDCQESLNLNEQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKTPSGESSKQIEGCSPAFRDSEKQIFGCEHYKRNCKLRAACCGKLFTCRFCHDNASDHSMDRKATLEMMCMQCLTIQPVGPICISPSCNGLTMAKYYCNICKFFDDERNVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGIKSTSHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEQLPEEYRDRYQDILCHDCDRKGTSRFHWLYHKCGSCGSYNTRVIKSEATNSSCL 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0221 1239 Gene3D nmb1532 protein domain like 301 449 - -
Aed7g0221 1239 Gene3D nmb1532 protein domain like 41 191 - -
Aed7g0221 1239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1118 1167 IPR013083 -
Aed7g0221 1239 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 23 1239 - -
Aed7g0221 1239 SMART ring_2 1123 1164 IPR001841 -
Aed7g0221 1239 Gene3D - 1194 1235 - -
Aed7g0221 1239 CDD Hr-like 302 431 - -
Aed7g0221 1239 MobiDBLite consensus disorder prediction 881 903 - -
Aed7g0221 1239 Pfam Hemerythrin HHE cation binding domain 649 812 IPR012312 -
Aed7g0221 1239 Pfam Hemerythrin HHE cation binding domain 50 173 IPR012312 -
Aed7g0221 1239 Pfam Hemerythrin HHE cation binding domain 299 433 IPR012312 -
Aed7g0221 1239 Pfam Ring finger domain 1122 1164 IPR001841 -
Aed7g0221 1239 SUPERFAMILY Zinc hairpin stack 1060 1116 IPR037275 -
Aed7g0221 1239 CDD Hr-like 651 811 - -
Aed7g0221 1239 ProSiteProfiles Zinc finger CHY-type profile. 987 1056 IPR008913 GO:0008270
Aed7g0221 1239 CDD RING-H2_Pirh2 1122 1165 - -
Aed7g0221 1239 Gene3D nmb1532 protein domain like 645 888 - -
Aed7g0221 1239 ProSiteProfiles Zinc finger RING-type profile. 1123 1165 IPR001841 -
Aed7g0221 1239 ProSiteProfiles Zinc finger CTCHY-type profile. 1059 1122 IPR017921 -
Aed7g0221 1239 CDD Hr-like 45 171 - -
Aed7g0221 1239 Pfam CHY zinc finger 994 1069 IPR008913 GO:0008270
Aed7g0221 1239 PANTHER CHY ZINC FINGER PROTEIN 23 1239 - -
Aed7g0221 1239 SUPERFAMILY CHY zinc finger-like 987 1051 IPR037274 GO:0008270
Aed7g0221 1239 SUPERFAMILY RING/U-box 1120 1175 - -
Aed7g0221 1239 Pfam Zinc-ribbon 1170 1227 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0221 Aed-Chr7 1569913 1579155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0221 1 1238 C2H2 Transcription Factor Family AT3G18290 66.057 0.0 1673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0221 K16276 - gmx:100791354 2411.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0221 7 1569913 1579155 Aed5g2555 5 26418322 26428386 ECH
Aed7g0221 7 1569913 1579155 Aed7g0221 7 1569913 1579155 ECH
Aed5g2555 5 26418322 26428386 Aed7g0221 7 1569913 1579155 PCT