Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0215 ATGAGACTAGCCATGTCTACTACTCCTTCAAAGAGCATAATCTGTTCCAGTGAAGATGATGATAATGAACTTAGAAGAGGGCCATGGAGTGTTGGAGAGGATGATCTTCTCACCAATTACATTGCCAATCATGGGGAAGGGAGATGGAATTTGCTGGCTATAAGTTCAGGTAAGAGTTGCAGATTGAGATGGCTAAATTATCTAAGGCCAAATGTTAAGAGAGGAAATTTAACCTCGGAAGAGCAGCTTTCGATTTTTGAACTCCACTCAAAGTGGGGCAACAGGTGGTCAAAAATTGCGCAACAGCTGCCAGGCAGAACAGACAATGAAATCAAGAACTATTGGAGAACAAGGATTCAGAAACAAGCAAAATATGTGAAATTAGAGGCACATAGAAGAACAGGATTTCTAGAATTTGTCAAGGGTCTACAGATGACAAGATGTCTTCATAGAGCACAAGAATCATCTCCTTCAGCCATGCCAAATCAAGACCAAGCAATTCCTACTGTTCCTCATTATTCATCATTTGGGATTGGGACAACACCAACAACACAAATCACATACCAGGGAGGTGGTCTCAATCATTTGAATCAGCATGAGCAGAAGTCAGAATCTGAACACAACAATGGTTCATGCATTTCCTCTTTAGAATCTGTAAATATCTCAAATATGAGTCAGCCTTTAGGATACACTACTACTAGTCAATTTCAGGCCTTAGATCACTGTGACTTTGGCATCTGTTCATATGATGGCTATAGCATAGATAACAATGCTTATGACATCGACATGGATTCCTTGAACCTGACAACCACAATGGTTGCTGAGAATATGGAACTCCCAATGATTGATTCCCAAATATCATCAGAAACCAATTGGCTAAACAAGGAATTTGCATGTAGCACATGGAGGAGCATGGATGAATTATGGCAGTTTAGGAACATAAAAAGATGA 951 0.3996 MRLAMSTTPSKSIICSSEDDDNELRRGPWSVGEDDLLTNYIANHGEGRWNLLAISSGKSCRLRWLNYLRPNVKRGNLTSEEQLSIFELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRIQKQAKYVKLEAHRRTGFLEFVKGLQMTRCLHRAQESSPSAMPNQDQAIPTVPHYSSFGIGTTPTTQITYQGGGLNHLNQHEQKSESEHNNGSCISSLESVNISNMSQPLGYTTTSQFQALDHCDFGICSYDGYSIDNNAYDIDMDSLNLTTTMVAENMELPMIDSQISSETNWLNKEFACSTWRSMDELWQFRNIKR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0215 316 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 5 311 - -
Aed7g0215 316 MobiDBLite consensus disorder prediction 1 25 - -
Aed7g0215 316 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Aed7g0215 316 MobiDBLite consensus disorder prediction 1 15 - -
Aed7g0215 316 CDD SANT 28 68 IPR001005 -
Aed7g0215 316 CDD SANT 78 117 IPR001005 -
Aed7g0215 316 Gene3D - 76 135 - -
Aed7g0215 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 68 IPR017930 -
Aed7g0215 316 SUPERFAMILY Homeodomain-like 24 115 IPR009057 -
Aed7g0215 316 ProSiteProfiles Myb-like domain profile. 21 68 IPR001005 -
Aed7g0215 316 Gene3D - 18 74 - -
Aed7g0215 316 Pfam Myb-like DNA-binding domain 26 68 IPR001005 -
Aed7g0215 316 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Aed7g0215 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Aed7g0215 316 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 5 311 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aed7g0215 316 SMART sant 73 121 IPR001005 -
Aed7g0215 316 SMART sant 25 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0215 Aed-Chr7 1537458 1538722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0215 15 156 MYB Transcription Factor Family AT1G25340 59.859 9.91e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed7g0215 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0215 K09422 - gmx:100804227 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0215 7 1537458 1538722 Aed5g2552 5 26400941 26403010 ECH
Aed7g0215 7 1537458 1538722 Aed7g0215 7 1537458 1538722 ECH