Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0214 ATGGCTGAATTCACAGAAAATTTGCAATTGCAAAGCATTAGACCCTCCCAGTTTCAATTCTTAGAGAATATTGATCCAAGCATGGAACTCCTAAACCAATTCATAGGGATGAACCAACATGTTTTAGAAAACTCAAACTTGACTATGCACAACTTGGTGCCTAATTTCTCCTCCTGTGACACCACCTTCTTGGGCCCTCAAGAGCCTGAGTTTCCAGAAAACTTGGAAGAAAATTTCCCTTCCCTTGTCCATCATCATGTCAACCACAATGCACTTCCCATTTTCCAAGCAGATAATGAGATCCATGAAGGTAAAAAGAGAAAATCCATGGATCTTCCTGAGACCAGTTCAGCTAACTCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGATCAAACATAGTTCTGGAAGAGGGAAGAGAGCAAAAAGCAATGTAACAGAAGAGGAAAAAGCAAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACTGATAGTCATAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATTAATGAGAAATTAAGGTGCTTACAGAACATTGTTCCAGGATGTTACAAGACCATGGGTATGGCAGTAATGTTGGATGAAATCATAAACTATGTGCAGTCCTTGCAGCATCAAGTAGAGTTCCTTTCTTTGAAGCTCACTGCAGCAAGTACCTTTTATGACTTCAATTCCGAGACAGATGCTTTGGAAACAATGCAGAGAGCAAGAGCATCCGAGGCAAAAGAGTTAGGGAAGTATAAGAGAGAAGGGCATGGAGAAGTTTCATTCTTTCAACCAGCATGGCCCCTTTGA 825 0.4145 MAEFTENLQLQSIRPSQFQFLENIDPSMELLNQFIGMNQHVLENSNLTMHNLVPNFSSCDTTFLGPQEPEFPENLEENFPSLVHHHVNHNALPIFQADNEIHEGKKRKSMDLPETSSANSTPAVSESGSKIKHSSGRGKRAKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELGKYKREGHGEVSFFQPAWPL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0214 274 Coils Coil 240 260 - -
Aed7g0214 274 MobiDBLite consensus disorder prediction 113 131 - -
Aed7g0214 274 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983
Aed7g0214 274 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 273 IPR024097 GO:0006355
Aed7g0214 274 SMART finulus 169 219 IPR011598 GO:0046983
Aed7g0214 274 PANTHER TRANSCRIPTION FACTOR BEE 1 2 273 - -
Aed7g0214 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 229 IPR036638 GO:0046983
Aed7g0214 274 MobiDBLite consensus disorder prediction 140 169 - -
Aed7g0214 274 Gene3D - 163 225 IPR036638 GO:0046983
Aed7g0214 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 213 IPR011598 GO:0046983
Aed7g0214 274 CDD bHLH_AtBPE_like 153 238 - -
Aed7g0214 274 MobiDBLite consensus disorder prediction 105 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0214 Aed-Chr7 1526101 1527628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0214 54 274 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 54.237 6.63e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g0214 HLH 0.00018 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0214 - - gmx:100806942 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0214 7 1526101 1527628 Aed5g2550 5 26389255 26390961 ECH
Aed7g0214 7 1526101 1527628 Aed7g0214 7 1526101 1527628 ECH