Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0197 ATGATGAGCAGCGAAATGAAAGAAGCAAGTGCCTTAGGAGGTAGAACCGCACGAGCATGCGAGAGCTGCCTAAAAGTAAGGGCTCGTTGGTATTGTGCAGCTGATGATGCTTTTCTTTGCCAAGGCTGTGACAACATGGTTCACTCAGCAAACCAACTTGCAAGCAGACACCAAAGGGTTAAGCTTCAAACTGCATCCTCTAAGGTCAACTACTCACTCATCCCTACTACTCATCATAATAATAACAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACTCCACGCCACAACAAGCACTCATCGGTGCAACAACAACAACAACAACAAAAACCATTATTACATGAAGAAGGAGTGTTTTTCAATAACACCATGAGTCTTCCCCTTGTGCCTGAGCTTGGAAGTGAAGAAGAACCATTGCTTATTAATGATATTGAGACTGAGGAGCAACTGATGTGTCGGGTGCCGGTGTTTGATGCTGCTGAGCTTTGTAGCATATACAAATTCAACGATGAAGTGAAGGACAAGGTTGTTGTAGCTGCTGGTGAAGAACTAGCCTTTGACTTGGAAAACTTTTCTTCCGAGTTTCTACCATCAGATACGGATCTTGCTGAGTTTGCTGCTGATGTGGAAAGCTTACTTGGAAACGGACCTGATGAGGATTCACCTGAGAACGTGAAAGGATCAGAACTGCTTCTTCTTGATTGCAAAGAAGAATATGGAGATGATGAAATGGTGGATGCATTATGTGTTAATGGAGCCAAAGAAGCAACATTGGTGAAGGTCAAAGATGAAGAAGAAATTGATGTAGACGACACAGCTTGCCATTTGGATTCGTTTCTTAATTGGAATATTGGTGAGTCTGAAGAATCACCTACACAGGAAGAAAATAAGGTGAGTCAAGTGGGAAGCAATAATAAGCAAGACATGTTTTTGAGGCTAAACTATGAAGAAGTAATTAGTGCTTGGGCAAGTCAAGGTTGTCCATGGACTACAGGAACTCCACCTAAGTTCAATTCTCATGAATATTGCTGGCCAGACTTCTTGGTAACTTCTTTTCAATCCTCTTTGCTTATGCATCAGCTGTATCTTCTTGCGCATTATCATATAGCCGGTCTCATATATCTGGCTAAAGGAGGAAGATTAAAATTCGTCGATATACCTGAAATCATTCATAGCAGGCATTGTAATGACCTTTCAGATGAAGTTGACATGAAAGTTTTGTTTTGTATTGTTAAGGGTTGGAGTGGTGGTGAATGCTGTTATGGGGAGGTGAGAAGCATAAGGGTGCATGCAGATGCAGGGGGAAGAGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACACGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCGGAAAAAAGACCTAGAATGAAAGGTCGATTTGTTAAGAGTATTAGATAG 1452 0.4194 MMSSEMKEASALGGRTARACESCLKVRARWYCAADDAFLCQGCDNMVHSANQLASRHQRVKLQTASSKVNYSLIPTTHHNNNKVAWHSGFTRKARTPRHNKHSSVQQQQQQQKPLLHEEGVFFNNTMSLPLVPELGSEEEPLLINDIETEEQLMCRVPVFDAAELCSIYKFNDEVKDKVVVAAGEELAFDLENFSSEFLPSDTDLAEFAADVESLLGNGPDEDSPENVKGSELLLLDCKEEYGDDEMVDALCVNGAKEATLVKVKDEEEIDVDDTACHLDSFLNWNIGESEESPTQEENKVSQVGSNNKQDMFLRLNYEEVISAWASQGCPWTTGTPPKFNSHEYCWPDFLVTSFQSSLLMHQLYLLAHYHIAGLIYLAKGGRLKFVDIPEIIHSRHCNDLSDEVDMKVLFCIVKGWSGGECCYGEVRSIRVHADAGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKSIR 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0197 483 ProSiteProfiles CCT domain profile. 439 481 IPR010402 GO:0005515
Aed7g0197 483 Pfam CCT motif 439 480 IPR010402 GO:0005515
Aed7g0197 483 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 2 481 - -
Aed7g0197 483 Pfam B-box zinc finger 17 62 IPR000315 GO:0008270
Aed7g0197 483 SMART bboxneu5 15 62 IPR000315 GO:0008270
Aed7g0197 483 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Aed7g0197 483 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 2 481 - -
Aed7g0197 483 CDD Bbox1_BBX-like 19 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0197 Aed-Chr7 1381771 1383489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0197 9 480 C2C2-CO-like Transcription Factor Family AT1G68520 36.327 2.33e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aed7g0197 zf-B_box 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0197 - - gmx:100802113 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2540 5 26338429 26339800 Aed7g0197 7 1381771 1383489 PCT